TubercuList - TMHMM

TransMembrane prediction using Hidden Markov Models for Rv0032

Residue number and Amino Acid	Probabilities
Residue number and Amino Acid	Inside	Membrane	Outside
1 M	0.00163	0.00000	0.99837
2 P	0.00163	0.00000	0.99837
3 T	0.00163	0.00000	0.99837
4 G	0.00163	0.00000	0.99837
5 L	0.00163	0.00000	0.99837
6 G	0.00163	0.00000	0.99837
7 Y	0.00163	0.00000	0.99837
8 D	0.00163	0.00000	0.99837
9 F	0.00163	0.00000	0.99837
10 L	0.00163	0.00000	0.99837
11 R	0.00163	0.00000	0.99837
12 P	0.00163	0.00000	0.99837
13 V	0.00163	0.00000	0.99837
14 E	0.00163	0.00000	0.99837
15 D	0.00163	0.00000	0.99837
16 S	0.00163	0.00000	0.99837
17 G	0.00163	0.00000	0.99837
18 I	0.00163	0.00000	0.99837
19 N	0.00163	0.00000	0.99837
20 D	0.00163	0.00000	0.99837
21 L	0.00163	0.00000	0.99837
22 K	0.00163	0.00000	0.99837
23 H	0.00163	0.00000	0.99837
24 Y	0.00163	0.00001	0.99836
25 Y	0.00163	0.00001	0.99836
26 F	0.00163	0.00001	0.99836
27 M	0.00163	0.00001	0.99836
28 A	0.00163	0.00001	0.99836
29 D	0.00163	0.00001	0.99836
30 L	0.00163	0.00001	0.99836
31 A	0.00163	0.00001	0.99836
32 D	0.00163	0.00001	0.99836
33 G	0.00163	0.00001	0.99836
34 Q	0.00163	0.00001	0.99836
35 P	0.00163	0.00002	0.99836
36 L	0.00163	0.00002	0.99836
37 G	0.00163	0.00002	0.99836
38 R	0.00163	0.00002	0.99836
39 A	0.00163	0.00002	0.99836
40 N	0.00163	0.00002	0.99836
41 L	0.00163	0.00002	0.99836
42 Y	0.00163	0.00002	0.99836
43 S	0.00163	0.00001	0.99836
44 V	0.00163	0.00001	0.99836
45 C	0.00163	0.00001	0.99836
46 F	0.00163	0.00001	0.99836
47 D	0.00164	0.00000	0.99836
48 L	0.00164	0.00000	0.99836
49 A	0.00164	0.00000	0.99836
50 T	0.00164	0.00000	0.99836
51 T	0.00164	0.00000	0.99836
52 D	0.00165	0.00000	0.99836
53 R	0.00165	0.00000	0.99836
54 K	0.00165	0.00000	0.99836
55 L	0.00165	0.00000	0.99836
56 T	0.00165	0.00000	0.99836
57 P	0.00165	0.00000	0.99836
58 A	0.00165	0.00000	0.99836
59 W	0.00165	0.00000	0.99836
60 R	0.00165	0.00000	0.99836
61 T	0.00164	0.00001	0.99836
62 T	0.00159	0.00005	0.99836
63 I	0.00151	0.00014	0.99836
64 K	0.00150	0.00015	0.99836
65 R	0.00147	0.00019	0.99835
66 W	0.00097	0.00072	0.99831
67 F	0.00086	0.00085	0.9983
68 P	0.00081	0.00091	0.99827
69 G	0.00078	0.00096	0.99827
70 F	0.00053	0.00125	0.99822
71 M	0.00049	0.00132	0.99818
72 T	0.00046	0.00136	0.99818
73 F	0.00040	0.00144	0.99816
74 R	0.00040	0.00144	0.99816
75 F	0.00039	0.00145	0.99816
76 L	0.00039	0.00145	0.99816
77 E	0.00039	0.00144	0.99816
78 C	0.00039	0.00144	0.99816
79 G	0.00039	0.00144	0.99816
80 L	0.00039	0.00144	0.99816
81 L	0.00039	0.00144	0.99817
82 T	0.00039	0.00144	0.99817
83 M	0.00039	0.00143	0.99817
84 V	0.00039	0.00137	0.99823
85 S	0.00040	0.00119	0.99841
86 N	0.00040	0.00098	0.99862
87 P	0.00040	0.00094	0.99866
88 L	0.00041	0.00090	0.99869
89 A	0.00045	0.00063	0.99892
90 L	0.00049	0.00040	0.9991
91 R	0.00057	0.00010	0.99932
92 S	0.00058	0.00007	0.99936
93 D	0.00058	0.00001	0.99941
94 T	0.00058	0.00000	0.99941
95 D	0.00058	0.00000	0.99942
96 L	0.00058	0.00000	0.99942
97 E	0.00058	0.00000	0.99942
98 R	0.00058	0.00000	0.99942
99 V	0.00058	0.00000	0.99942
100 L	0.00058	0.00000	0.99942
101 P	0.00058	0.00000	0.99942
102 V	0.00058	0.00000	0.99942
103 L	0.00058	0.00000	0.99942
104 A	0.00058	0.00000	0.99942
105 G	0.00058	0.00000	0.99942
106 Q	0.00058	0.00000	0.99942
107 M	0.00058	0.00000	0.99942
108 D	0.00058	0.00000	0.99942
109 Q	0.00058	0.00000	0.99942
110 L	0.00058	0.00000	0.99942
111 A	0.00058	0.00000	0.99942
112 H	0.00058	0.00000	0.99942
113 D	0.00058	0.00000	0.99942
114 D	0.00058	0.00000	0.99942
115 G	0.00058	0.00000	0.99942
116 S	0.00058	0.00000	0.99942
117 D	0.00058	0.00000	0.99942
118 F	0.00058	0.00000	0.99942
119 L	0.00058	0.00000	0.99942
120 M	0.00058	0.00000	0.99942
121 I	0.00058	0.00000	0.99942
122 R	0.00058	0.00000	0.99942
123 D	0.00058	0.00000	0.99942
124 V	0.00058	0.00000	0.99942
125 D	0.00058	0.00000	0.99942
126 P	0.00058	0.00000	0.99942
127 E	0.00058	0.00000	0.99942
128 H	0.00058	0.00000	0.99942
129 Y	0.00058	0.00000	0.99942
130 Q	0.00058	0.00000	0.99942
131 R	0.00058	0.00000	0.99942
132 Y	0.00058	0.00000	0.99942
133 L	0.00058	0.00000	0.99942
134 D	0.00058	0.00000	0.99942
135 I	0.00058	0.00000	0.99942
136 L	0.00058	0.00000	0.99942
137 R	0.00058	0.00000	0.99942
138 P	0.00058	0.00000	0.99942
139 L	0.00058	0.00000	0.99942
140 G	0.00058	0.00000	0.99942
141 F	0.00058	0.00000	0.99942
142 R	0.00058	0.00000	0.99942
143 P	0.00058	0.00000	0.99942
144 A	0.00058	0.00000	0.99942
145 L	0.00058	0.00000	0.99942
146 G	0.00058	0.00000	0.99942
147 F	0.00058	0.00000	0.99942
148 S	0.00058	0.00000	0.99942
149 R	0.00058	0.00000	0.99942
150 V	0.00058	0.00000	0.99942
151 D	0.00058	0.00000	0.99942
152 T	0.00058	0.00000	0.99942
153 T	0.00058	0.00000	0.99942
154 I	0.00058	0.00000	0.99942
155 S	0.00058	0.00000	0.99942
156 W	0.00058	0.00000	0.99942
157 S	0.00058	0.00000	0.99942
158 S	0.00058	0.00000	0.99942
159 V	0.00058	0.00000	0.99942
160 E	0.00058	0.00000	0.99942
161 E	0.00058	0.00000	0.99942
162 A	0.00058	0.00000	0.99942
163 L	0.00058	0.00000	0.99942
164 G	0.00058	0.00000	0.99942
165 C	0.00058	0.00000	0.99942
166 L	0.00058	0.00000	0.99942
167 S	0.00058	0.00000	0.99942
168 H	0.00058	0.00000	0.99942
169 K	0.00058	0.00000	0.99942
170 R	0.00058	0.00000	0.99942
171 R	0.00058	0.00000	0.99942
172 L	0.00058	0.00000	0.99942
173 P	0.00058	0.00000	0.99942
174 L	0.00058	0.00000	0.99942
175 K	0.00058	0.00000	0.99942
176 T	0.00058	0.00000	0.99942
177 S	0.00058	0.00000	0.99942
178 L	0.00058	0.00000	0.99942
179 E	0.00058	0.00000	0.99942
180 F	0.00058	0.00000	0.99942
181 R	0.00058	0.00000	0.99942
182 E	0.00058	0.00000	0.99942
183 R	0.00058	0.00000	0.99942
184 F	0.00058	0.00000	0.99942
185 G	0.00058	0.00000	0.99942
186 I	0.00058	0.00000	0.99942
187 E	0.00058	0.00000	0.99942
188 V	0.00058	0.00000	0.99942
189 E	0.00058	0.00000	0.99942
190 E	0.00058	0.00000	0.99942
191 L	0.00058	0.00000	0.99942
192 D	0.00058	0.00000	0.99942
193 E	0.00058	0.00000	0.99942
194 Y	0.00058	0.00000	0.99942
195 A	0.00058	0.00000	0.99942
196 E	0.00058	0.00000	0.99942
197 H	0.00058	0.00000	0.99942
198 A	0.00058	0.00000	0.99942
199 P	0.00058	0.00000	0.99942
200 V	0.00058	0.00000	0.99942
201 L	0.00058	0.00000	0.99942
202 A	0.00058	0.00000	0.99942
203 R	0.00058	0.00000	0.99942
204 L	0.00058	0.00000	0.99942
205 W	0.00058	0.00000	0.99942
206 R	0.00058	0.00000	0.99942
207 N	0.00058	0.00000	0.99942
208 V	0.00058	0.00000	0.99942
209 K	0.00058	0.00000	0.99942
210 T	0.00058	0.00000	0.99942
211 E	0.00058	0.00000	0.99942
212 A	0.00058	0.00000	0.99942
213 K	0.00058	0.00000	0.99942
214 D	0.00058	0.00000	0.99942
215 Y	0.00058	0.00000	0.99942
216 Q	0.00058	0.00000	0.99942
217 R	0.00058	0.00000	0.99942
218 E	0.00058	0.00000	0.99942
219 D	0.00058	0.00000	0.99942
220 L	0.00058	0.00000	0.99942
221 N	0.00058	0.00000	0.99942
222 P	0.00058	0.00000	0.99942
223 E	0.00058	0.00000	0.99942
224 F	0.00058	0.00000	0.99942
225 F	0.00058	0.00000	0.99942
226 A	0.00058	0.00000	0.99942
227 A	0.00058	0.00000	0.99942
228 C	0.00058	0.00000	0.99942
229 S	0.00058	0.00000	0.99942
230 R	0.00058	0.00000	0.99942
231 H	0.00058	0.00000	0.99942
232 L	0.00058	0.00000	0.99942
233 H	0.00058	0.00000	0.99942
234 G	0.00058	0.00000	0.99942
235 R	0.00058	0.00000	0.99942
236 S	0.00058	0.00000	0.99942
237 R	0.00058	0.00001	0.99942
238 L	0.00019	0.00040	0.99941
239 W	0.00008	0.00052	0.9994
240 L	0.00004	0.00057	0.9994
241 F	0.00004	0.00057	0.9994
242 R	0.00004	0.00057	0.99939
243 Y	0.00004	0.00057	0.99939
244 Q	0.00004	0.00057	0.99939
245 G	0.00003	0.00057	0.99939
246 T	0.00003	0.00058	0.99939
247 P	0.00003	0.00058	0.99939
248 I	0.00003	0.00058	0.99938
249 A	0.00003	0.00059	0.99938
250 F	0.00003	0.00059	0.99938
251 F	0.00003	0.00059	0.99938
252 L	0.00003	0.00059	0.99938
253 N	0.00003	0.00059	0.99938
254 V	0.00003	0.00059	0.99938
255 W	0.00003	0.00058	0.99939
256 G	0.00003	0.00050	0.99947
257 A	0.00004	0.00042	0.99955
258 D	0.00005	0.00007	0.99988
259 E	0.00005	0.00003	0.99992
260 N	0.00005	0.00003	0.99992
261 Y	0.00005	0.00003	0.99992
262 I	0.00005	0.00003	0.99992
263 L	0.00005	0.00002	0.99993
264 L	0.00005	0.00002	0.99993
265 E	0.00005	0.00002	0.99993
266 W	0.00005	0.00001	0.99993
267 G	0.00005	0.00001	0.99993
268 I	0.00006	0.00001	0.99994
269 D	0.00006	0.00000	0.99994
270 R	0.00006	0.00000	0.99994
271 D	0.00006	0.00000	0.99994
272 F	0.00006	0.00000	0.99994
273 E	0.00006	0.00000	0.99994
274 H	0.00006	0.00000	0.99994
275 Y	0.00006	0.00000	0.99994
276 R	0.00006	0.00000	0.99994
277 K	0.00006	0.00000	0.99994
278 A	0.00006	0.00000	0.99994
279 N	0.00006	0.00000	0.99994
280 L	0.00006	0.00001	0.99994
281 Y	0.00006	0.00001	0.99994
282 R	0.00006	0.00001	0.99994
283 A	0.00006	0.00001	0.99994
284 A	0.00006	0.00001	0.99994
285 L	0.00006	0.00001	0.99994
286 M	0.00006	0.00001	0.99994
287 L	0.00006	0.00001	0.99994
288 S	0.00006	0.00001	0.99994
289 L	0.00006	0.00001	0.99994
290 K	0.00006	0.00001	0.99994
291 D	0.00006	0.00001	0.99994
292 A	0.00006	0.00001	0.99994
293 I	0.00006	0.00000	0.99994
294 S	0.00006	0.00000	0.99994
295 R	0.00006	0.00000	0.99994
296 D	0.00006	0.00000	0.99994
297 K	0.00006	0.00000	0.99994
298 R	0.00006	0.00000	0.99994
299 R	0.00006	0.00000	0.99994
300 M	0.00006	0.00000	0.99994
301 E	0.00006	0.00000	0.99994
302 M	0.00005	0.00000	0.99994
303 G	0.00005	0.00001	0.99994
304 I	0.00005	0.00001	0.99994
305 T	0.00005	0.00001	0.99994
306 N	0.00005	0.00001	0.99994
307 Y	0.00004	0.00001	0.99994
308 F	0.00004	0.00001	0.99994
309 T	0.00004	0.00002	0.99994
310 K	0.00004	0.00002	0.99994
311 L	0.00004	0.00002	0.99994
312 R	0.00004	0.00002	0.99994
313 I	0.00004	0.00002	0.99994
314 P	0.00004	0.00002	0.99994
315 G	0.00004	0.00002	0.99994
316 A	0.00004	0.00002	0.99994
317 R	0.00004	0.00002	0.99994
318 V	0.00004	0.00002	0.99994
319 I	0.00004	0.00002	0.99994
320 P	0.00004	0.00002	0.99994
321 T	0.00004	0.00002	0.99994
322 I	0.00004	0.00002	0.99994
323 Y	0.00004	0.00002	0.99994
324 F	0.00004	0.00001	0.99994
325 L	0.00004	0.00001	0.99995
326 R	0.00004	0.00000	0.99995
327 H	0.00004	0.00000	0.99996
328 S	0.00004	0.00000	0.99996
329 T	0.00004	0.00000	0.99996
330 D	0.00004	0.00000	0.99996
331 P	0.00004	0.00000	0.99996
332 V	0.00004	0.00000	0.99996
333 H	0.00004	0.00000	0.99996
334 T	0.00004	0.00000	0.99996
335 A	0.00004	0.00000	0.99996
336 T	0.00004	0.00000	0.99996
337 L	0.00004	0.00000	0.99996
338 A	0.00004	0.00000	0.99996
339 R	0.00004	0.00000	0.99996
340 M	0.00004	0.00000	0.99996
341 M	0.00004	0.00000	0.99996
342 M	0.00004	0.00000	0.99996
343 H	0.00004	0.00000	0.99996
344 N	0.00004	0.00000	0.99996
345 I	0.00004	0.00000	0.99996
346 Q	0.00004	0.00000	0.99996
347 R	0.00004	0.00000	0.99996
348 P	0.00004	0.00000	0.99996
349 T	0.00004	0.00000	0.99996
350 L	0.00004	0.00000	0.99996
351 P	0.00004	0.00000	0.99996
352 D	0.00004	0.00000	0.99996
353 D	0.00004	0.00000	0.99996
354 M	0.00004	0.00000	0.99996
355 S	0.00004	0.00000	0.99996
356 E	0.00004	0.00000	0.99996
357 E	0.00004	0.00000	0.99996
358 F	0.00004	0.00000	0.99996
359 C	0.00004	0.00000	0.99996
360 R	0.00004	0.00000	0.99996
361 W	0.00004	0.00000	0.99996
362 E	0.00004	0.00000	0.99996
363 E	0.00004	0.00000	0.99996
364 R	0.00004	0.00000	0.99996
365 I	0.00004	0.00000	0.99996
366 R	0.00004	0.00000	0.99996
367 L	0.00004	0.00000	0.99996
368 D	0.00004	0.00000	0.99996
369 Q	0.00004	0.00000	0.99996
370 D	0.00004	0.00000	0.99996
371 G	0.00004	0.00000	0.99996
372 L	0.00004	0.00000	0.99996
373 P	0.00004	0.00000	0.99996
374 E	0.00004	0.00000	0.99996
375 H	0.00004	0.00000	0.99996
376 D	0.00004	0.00000	0.99996
377 I	0.00004	0.00000	0.99996
378 F	0.00004	0.00000	0.99996
379 R	0.00004	0.00000	0.99996
380 K	0.00004	0.00000	0.99996
381 I	0.00004	0.00000	0.99996
382 D	0.00004	0.00000	0.99996
383 R	0.00004	0.00000	0.99996
384 Q	0.00004	0.00000	0.99996
385 H	0.00004	0.00000	0.99996
386 K	0.00004	0.00000	0.99996
387 Y	0.00004	0.00000	0.99996
388 T	0.00004	0.00001	0.99996
389 G	0.00004	0.00001	0.99996
390 L	0.00004	0.00001	0.99996
391 K	0.00004	0.00001	0.99996
392 L	0.00004	0.00001	0.99996
393 G	0.00004	0.00001	0.99996
394 G	0.00004	0.00001	0.99996
395 V	0.00004	0.00001	0.99996
396 Y	0.00004	0.00001	0.99996
397 G	0.00004	0.00001	0.99996
398 F	0.00004	0.00001	0.99996
399 Y	0.00004	0.00001	0.99996
400 P	0.00004	0.00001	0.99996
401 R	0.00004	0.00001	0.99996
402 F	0.00004	0.00001	0.99996
403 T	0.00004	0.00001	0.99996
404 G	0.00004	0.00000	0.99996
405 P	0.00004	0.00000	0.99996
406 Q	0.00004	0.00000	0.99996
407 R	0.00004	0.00000	0.99996
408 S	0.00004	0.00000	0.99996
409 T	0.00004	0.00000	0.99996
410 V	0.00004	0.00000	0.99996
411 K	0.00004	0.00000	0.99996
412 A	0.00004	0.00000	0.99996
413 A	0.00004	0.00000	0.99996
414 E	0.00004	0.00000	0.99996
415 L	0.00004	0.00000	0.99996
416 G	0.00004	0.00000	0.99996
417 E	0.00004	0.00000	0.99996
418 I	0.00004	0.00000	0.99996
419 V	0.00004	0.00000	0.99996
420 L	0.00004	0.00000	0.99996
421 L	0.00004	0.00000	0.99996
422 G	0.00004	0.00000	0.99996
423 T	0.00004	0.00000	0.99996
424 N	0.00004	0.00000	0.99996
425 S	0.00004	0.00000	0.99996
426 Y	0.00004	0.00000	0.99996
427 L	0.00004	0.00000	0.99996
428 G	0.00004	0.00000	0.99996
429 L	0.00004	0.00000	0.99996
430 A	0.00004	0.00000	0.99996
431 T	0.00004	0.00000	0.99996
432 H	0.00004	0.00000	0.99996
433 P	0.00004	0.00000	0.99996
434 E	0.00004	0.00000	0.99996
435 V	0.00004	0.00000	0.99996
436 V	0.00004	0.00000	0.99996
437 E	0.00004	0.00000	0.99996
438 A	0.00004	0.00000	0.99996
439 S	0.00004	0.00000	0.99996
440 A	0.00004	0.00000	0.99996
441 E	0.00004	0.00000	0.99996
442 A	0.00004	0.00000	0.99996
443 T	0.00004	0.00000	0.99996
444 R	0.00004	0.00000	0.99996
445 R	0.00004	0.00000	0.99996
446 Y	0.00004	0.00000	0.99996
447 G	0.00004	0.00000	0.99996
448 T	0.00004	0.00000	0.99996
449 G	0.00004	0.00000	0.99996
450 C	0.00004	0.00000	0.99996
451 S	0.00004	0.00000	0.99996
452 G	0.00004	0.00000	0.99996
453 S	0.00004	0.00000	0.99996
454 P	0.00004	0.00000	0.99996
455 L	0.00004	0.00000	0.99996
456 L	0.00004	0.00000	0.99996
457 N	0.00004	0.00000	0.99996
458 G	0.00004	0.00000	0.99996
459 T	0.00004	0.00000	0.99996
460 L	0.00004	0.00000	0.99996
461 D	0.00004	0.00000	0.99996
462 L	0.00004	0.00000	0.99996
463 H	0.00004	0.00000	0.99996
464 V	0.00004	0.00000	0.99996
465 S	0.00004	0.00000	0.99996
466 L	0.00004	0.00000	0.99996
467 E	0.00004	0.00000	0.99996
468 Q	0.00004	0.00000	0.99996
469 E	0.00004	0.00000	0.99996
470 L	0.00004	0.00000	0.99996
471 A	0.00004	0.00000	0.99996
472 C	0.00004	0.00000	0.99996
473 F	0.00004	0.00000	0.99996
474 L	0.00004	0.00000	0.99996
475 G	0.00004	0.00000	0.99996
476 K	0.00004	0.00000	0.99996
477 P	0.00004	0.00000	0.99996
478 A	0.00004	0.00000	0.99996
479 A	0.00004	0.00000	0.99996
480 V	0.00004	0.00000	0.99996
481 L	0.00004	0.00000	0.99996
482 C	0.00004	0.00000	0.99996
483 S	0.00004	0.00000	0.99996
484 T	0.00004	0.00000	0.99996
485 G	0.00004	0.00000	0.99996
486 Y	0.00004	0.00000	0.99996
487 Q	0.00004	0.00000	0.99996
488 S	0.00004	0.00000	0.99996
489 N	0.00004	0.00000	0.99996
490 L	0.00004	0.00000	0.99996
491 A	0.00004	0.00000	0.99996
492 A	0.00004	0.00000	0.99996
493 I	0.00004	0.00000	0.99996
494 S	0.00004	0.00000	0.99996
495 A	0.00004	0.00000	0.99996
496 L	0.00004	0.00000	0.99996
497 C	0.00004	0.00000	0.99996
498 E	0.00004	0.00000	0.99996
499 S	0.00004	0.00000	0.99996
500 G	0.00004	0.00000	0.99996
501 D	0.00004	0.00000	0.99996
502 M	0.00004	0.00000	0.99996
503 I	0.00004	0.00000	0.99996
504 I	0.00004	0.00000	0.99996
505 Q	0.00004	0.00000	0.99996
506 D	0.00004	0.00000	0.99996
507 A	0.00004	0.00000	0.99996
508 L	0.00004	0.00000	0.99996
509 N	0.00004	0.00000	0.99996
510 H	0.00004	0.00000	0.99996
511 R	0.00004	0.00000	0.99996
512 S	0.00004	0.00000	0.99996
513 L	0.00004	0.00000	0.99996
514 F	0.00004	0.00000	0.99996
515 D	0.00004	0.00000	0.99996
516 A	0.00004	0.00000	0.99996
517 A	0.00004	0.00000	0.99996
518 R	0.00004	0.00000	0.99996
519 L	0.00004	0.00000	0.99996
520 S	0.00004	0.00000	0.99996
521 G	0.00004	0.00000	0.99996
522 A	0.00004	0.00000	0.99996
523 D	0.00004	0.00000	0.99996
524 F	0.00004	0.00000	0.99996
525 T	0.00004	0.00000	0.99996
526 L	0.00004	0.00000	0.99996
527 Y	0.00004	0.00000	0.99996
528 R	0.00004	0.00000	0.99996
529 H	0.00004	0.00000	0.99996
530 N	0.00004	0.00000	0.99996
531 D	0.00004	0.00000	0.99996
532 M	0.00004	0.00000	0.99996
533 D	0.00004	0.00000	0.99996
534 H	0.00004	0.00000	0.99996
535 L	0.00004	0.00000	0.99996
536 A	0.00004	0.00000	0.99996
537 R	0.00004	0.00000	0.99996
538 V	0.00004	0.00000	0.99996
539 L	0.00004	0.00000	0.99996
540 R	0.00004	0.00000	0.99996
541 R	0.00004	0.00000	0.99996
542 T	0.00004	0.00000	0.99996
543 E	0.00004	0.00000	0.99996
544 G	0.00004	0.00000	0.99996
545 R	0.00004	0.00000	0.99996
546 R	0.00004	0.00000	0.99996
547 R	0.00004	0.00001	0.99995
548 I	0.00004	0.00008	0.99988
549 I	0.00004	0.00013	0.99983
550 V	0.00004	0.00013	0.99983
551 V	0.00004	0.00013	0.99983
552 D	0.00004	0.00013	0.99983
553 A	0.00004	0.00013	0.99983
554 V	0.00004	0.00013	0.99983
555 F	0.00004	0.00013	0.99983
556 S	0.00004	0.00013	0.99983
557 M	0.00004	0.00013	0.99983
558 E	0.00004	0.00013	0.99983
559 G	0.00004	0.00013	0.99983
560 T	0.00004	0.00013	0.99983
561 V	0.00004	0.00013	0.99983
562 A	0.00004	0.00013	0.99983
563 D	0.00004	0.00013	0.99983
564 L	0.00004	0.00013	0.99983
565 A	0.00004	0.00013	0.99983
566 T	0.00004	0.00013	0.99983
567 I	0.00004	0.00013	0.99983
568 A	0.00005	0.00011	0.99983
569 E	0.00007	0.00010	0.99983
570 L	0.00007	0.00009	0.99983
571 A	0.00012	0.00004	0.99983
572 D	0.00016	0.00000	0.99983
573 R	0.00016	0.00000	0.99983
574 H	0.00016	0.00000	0.99983
575 G	0.00016	0.00000	0.99983
576 C	0.00016	0.00000	0.99983
577 R	0.00016	0.00000	0.99983
578 V	0.00016	0.00000	0.99983
579 Y	0.00016	0.00000	0.99983
580 V	0.00016	0.00000	0.99983
581 D	0.00016	0.00000	0.99983
582 E	0.00016	0.00000	0.99983
583 S	0.00016	0.00000	0.99983
584 H	0.00016	0.00000	0.99983
585 A	0.00016	0.00000	0.99983
586 L	0.00016	0.00000	0.99983
587 G	0.00016	0.00000	0.99983
588 V	0.00016	0.00000	0.99983
589 L	0.00016	0.00000	0.99983
590 G	0.00016	0.00000	0.99983
591 P	0.00016	0.00000	0.99983
592 D	0.00016	0.00001	0.99983
593 G	0.00016	0.00001	0.99983
594 R	0.00016	0.00001	0.99983
595 G	0.00016	0.00001	0.99982
596 A	0.00016	0.00002	0.99981
597 S	0.00016	0.00002	0.99981
598 A	0.00016	0.00003	0.99981
599 A	0.00016	0.00003	0.99981
600 L	0.00016	0.00003	0.99981
601 G	0.00016	0.00004	0.99979
602 V	0.00016	0.00010	0.99974
603 L	0.00016	0.00026	0.99958
604 A	0.00016	0.00038	0.99946
605 R	0.00016	0.00038	0.99945
606 M	0.00017	0.00046	0.99938
607 D	0.00017	0.00054	0.9993
608 V	0.00016	0.00093	0.99891
609 V	0.00016	0.00107	0.99876
610 M	0.00016	0.00108	0.99876
611 G	0.00016	0.00108	0.99875
612 T	0.00016	0.00108	0.99875
613 F	0.00016	0.00108	0.99875
614 S	0.00017	0.00108	0.99875
615 K	0.00017	0.00108	0.99875
616 S	0.00017	0.00108	0.99875
617 F	0.00017	0.00108	0.99875
618 A	0.00017	0.00108	0.99875
619 S	0.00018	0.00107	0.99875
620 V	0.00018	0.00107	0.99875
621 G	0.00018	0.00106	0.99875
622 G	0.00019	0.00106	0.99875
623 F	0.00019	0.00106	0.99875
624 I	0.00021	0.00104	0.99875
625 A	0.00028	0.00097	0.99875
626 G	0.00068	0.00057	0.99875
627 D	0.00116	0.00009	0.99875
628 R	0.00120	0.00005	0.99875
629 P	0.00120	0.00004	0.99875
630 V	0.00120	0.00004	0.99875
631 V	0.00122	0.00003	0.99875
632 D	0.00124	0.00000	0.99875
633 Y	0.00124	0.00001	0.99875
634 I	0.00124	0.00001	0.99875
635 R	0.00124	0.00001	0.99875
636 H	0.00124	0.00001	0.99875
637 N	0.00121	0.00012	0.99867
638 G	0.00117	0.00024	0.99858
639 S	0.00115	0.00044	0.9984
640 G	0.00115	0.00076	0.99809
641 H	0.00115	0.00087	0.99798
642 V	0.00114	0.00113	0.99773
643 F	0.00114	0.00120	0.99766
644 S	0.00114	0.00123	0.99763
645 A	0.00114	0.00126	0.99759
646 S	0.00114	0.00126	0.99759
647 L	0.00114	0.00127	0.99759
648 P	0.00114	0.00127	0.99759
649 P	0.00114	0.00127	0.99759
650 A	0.00114	0.00127	0.99759
651 A	0.00114	0.00127	0.99759
652 A	0.00114	0.00127	0.99759
653 A	0.00114	0.00127	0.99759
654 A	0.00114	0.00126	0.99759
655 T	0.00115	0.00126	0.99759
656 H	0.00115	0.00125	0.9976
657 A	0.00115	0.00125	0.9976
658 A	0.00115	0.00124	0.99761
659 L	0.00117	0.00121	0.99762
660 R	0.00148	0.00086	0.99766
661 V	0.00158	0.00074	0.99768
662 S	0.00194	0.00037	0.99769
663 R	0.00226	0.00005	0.99769
664 R	0.00230	0.00001	0.99769
665 E	0.00231	0.00000	0.99769
666 P	0.00231	0.00000	0.99769
667 D	0.00231	0.00000	0.99769
668 R	0.00231	0.00000	0.99769
669 R	0.00231	0.00000	0.99769
670 A	0.00230	0.00001	0.99769
671 R	0.00230	0.00001	0.99769
672 V	0.00230	0.00002	0.99769
673 L	0.00230	0.00002	0.99769
674 A	0.00230	0.00002	0.99769
675 A	0.00230	0.00002	0.99769
676 A	0.00230	0.00002	0.99769
677 E	0.00230	0.00002	0.99769
678 Y	0.00230	0.00002	0.99769
679 M	0.00230	0.00002	0.99769
680 A	0.00230	0.00002	0.99769
681 T	0.00230	0.00002	0.99769
682 G	0.00230	0.00002	0.99769
683 L	0.00230	0.00002	0.99769
684 A	0.00230	0.00002	0.99769
685 R	0.00230	0.00002	0.99768
686 Q	0.00230	0.00006	0.99764
687 G	0.00229	0.00012	0.99758
688 Y	0.00229	0.00036	0.99735
689 Q	0.00228	0.00091	0.99681
690 A	0.00222	0.00178	0.996
691 E	0.00219	0.00407	0.99374
692 Y	0.00213	0.00675	0.99111
693 H	0.00210	0.00847	0.98943
694 G	0.00197	0.01100	0.98703
695 T	0.00193	0.01226	0.98581
696 A	0.00191	0.01316	0.98493
697 I	0.00191	0.01328	0.98481
698 V	0.00191	0.01331	0.98479
699 P	0.00191	0.01331	0.98478
700 V	0.00191	0.01331	0.98478
701 I	0.00191	0.01331	0.98478
702 L	0.00191	0.01331	0.98478
703 G	0.00191	0.01331	0.98478
704 N	0.00191	0.01331	0.98478
705 P	0.00191	0.01330	0.98478
706 T	0.00192	0.01330	0.98478
707 V	0.00194	0.01328	0.98478
708 A	0.00211	0.01310	0.98478
709 H	0.00241	0.01280	0.9848
710 A	0.00250	0.01270	0.98481
711 G	0.00268	0.01250	0.98482
712 Y	0.00362	0.01153	0.98485
713 L	0.00511	0.00995	0.98494
714 R	0.01209	0.00282	0.98509
715 L	0.01278	0.00211	0.9851
716 M	0.01401	0.00086	0.98512
717 R	0.01478	0.00005	0.98517
718 S	0.01481	0.00001	0.98518
719 G	0.01482	0.00000	0.98518
720 V	0.01482	0.00000	0.98518
721 Y	0.01482	0.00000	0.98518
722 V	0.01482	0.00000	0.98518
723 N	0.01482	0.00000	0.98518
724 P	0.01482	0.00000	0.98518
725 V	0.01482	0.00000	0.98518
726 A	0.01482	0.00000	0.98518
727 P	0.01482	0.00000	0.98518
728 P	0.01482	0.00000	0.98518
729 A	0.01482	0.00000	0.98518
730 V	0.01482	0.00000	0.98518
731 P	0.01482	0.00000	0.98518
732 E	0.01482	0.00000	0.98518
733 E	0.01482	0.00000	0.98518
734 R	0.01482	0.00000	0.98518
735 S	0.01482	0.00000	0.98518
736 G	0.01482	0.00000	0.98518
737 F	0.01482	0.00000	0.98518
738 R	0.01482	0.00000	0.98518
739 T	0.01482	0.00000	0.98518
740 S	0.01482	0.00000	0.98518
741 Y	0.01482	0.00000	0.98518
742 L	0.01482	0.00000	0.98518
743 A	0.01482	0.00000	0.98518
744 D	0.01482	0.00000	0.98518
745 H	0.01482	0.00000	0.98518
746 R	0.01482	0.00000	0.98518
747 Q	0.01482	0.00000	0.98518
748 S	0.01482	0.00000	0.98518
749 D	0.01482	0.00000	0.98518
750 L	0.01482	0.00000	0.98518
751 D	0.01482	0.00000	0.98518
752 R	0.01482	0.00000	0.98518
753 A	0.01482	0.00000	0.98518
754 L	0.01482	0.00000	0.98518
755 H	0.01482	0.00000	0.98518
756 V	0.01482	0.00000	0.98518
757 F	0.01482	0.00000	0.98518
758 A	0.01482	0.00000	0.98518
759 G	0.01482	0.00000	0.98518
760 L	0.01482	0.00000	0.98518
761 A	0.01482	0.00000	0.98518
762 E	0.01482	0.00000	0.98518
763 D	0.01482	0.00000	0.98518
764 L	0.01482	0.00000	0.98518
765 T	0.01482	0.00000	0.98518
766 P	0.01482	0.00000	0.98518
767 Q	0.01482	0.00000	0.98518
768 G	0.01482	0.00000	0.98518
769 A	0.01482	0.00000	0.98518
770 A	0.01482	0.00000	0.98518
771 L	0.01482	0.00000	0.98518

General Statistics

Length: 771

Number of predicted TMHs: 0

Exp number of AAs in TMHs: 0.37878

Exp number, first 60 AAs: 0.00031

Total prob of N-in: 0.00163

outside: from residue 1 to 771

TMHMM predicts transmembrane helices and the location of the intervening loop regions.

If the whole sequence is labeled as inside or outside, the prediction is that it contains no membrane helices. It is probably not wise to interpret it as a prediction of location. The prediction gives the most probable location and orientation of transmembrane helices in the sequence.

Plot of probabilities

The plot shows the probabilities of inside/outside/TM helix. Possible weak TM helices are sometimes not predicted, and one can get an idea of the certainty of each segment in the prediction.

At the top of the plot (between 1 and 1.2) the best prediction is shown.

The plot is obtained by calculating the total probability that a residue sits in helix, inside, or outside summed over all possible paths through the model. Sometimes it seems like the plot and the prediction are contradictory, but that is because the plot shows probabilities for each residue, whereas the prediction is the over-all most probable structure. Therefore the plot should be seen as a complementary source of information.

Remarks

Predicted TM segments in the n-terminal region sometimes turn out to be signal peptides.

One of the most common mistakes by the program is to reverse the direction of proteins with one TM segment.

The program does not predict whether a non-membrane protein is cytoplasmic or not.

This prediction has been generated using TMHMM Server v. 2.0