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Search term: MTB000063

General annotation | Coordinates | Sequence | Structural information | Orthologs/Cross-references | Interacting Drugs/Compounds | Bibliography
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General annotation
Gene namemcr11
Rv numberMTB000063
Synonym(s)MTS0997
TypencRNA
FunctionUnknown
ProductPutative small regulatory RNA
Commentsmcr11, putative small regulatory RNA (See DiChiara et al., 2010). 5'-end mapped by RLM-RACE in M. tuberculosis H37Rv, 3'-end not mapped (See Arnvig et al., 2011).
Gene length (bp)131
Location (kb)1413.09


Functional categorystable RNAs


TranscriptomeDetected by Northern blot in M. tuberculosis H37Rv (See DiChiara et al., 2010). Detected by RNA-seq and Northern blot in M. tuberculosis H37Rv (See Arnvig et al., 2011).
Mutation Check for mutants available at TARGET website


Coordinates
TypeStartEndOrientation
ncRNA14130941413224-
-10_signal14132321413237-
-35_signal14132551413260-


Protein sequence in FASTA format
No protein sequence available for RNAs
Genomic sequence

Add extra bases upstream (5') and downstream (3')



Bibliography
Dichiara JM, Contreras-Martinez LM, Livny J, Smith D, McDonough KA, Belfort M,
Multiple small RNAs identified in Mycobacterium bovis BCG are also expressed in Mycobacterium tuberculosis and Mycobacterium smegmatis.
Nucleic Acids Res (2010) 38(12):4067-78
Cited for: Sequence
Arnvig KB, Comas I, Thomson NR, Houghton J, Boshoff HI, Croucher NJ, Rose G, Perkins TT, Parkhill J, Dougan G, Young DB,
Sequence-based analysis uncovers an abundance of non-coding RNA in the total transcriptome of Mycobacterium tuberculosis.
PLoS Pathog (2011) 7(11):e1002342
Cited for: Sequence