BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv2258c

Length=353
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15609395|ref|NP_216774.1|  transcriptional regulator [Mycobact...   715    0.0   
gi|340627265|ref|YP_004745717.1|  putative transcriptional regula...   711    0.0   
gi|289754365|ref|ZP_06513743.1|  transcriptional regulator [Mycob...   707    0.0   
gi|289447891|ref|ZP_06437635.1|  transcriptional regulator [Mycob...   580    1e-163
gi|183983339|ref|YP_001851630.1|  transcriptional regulatory prot...   575    4e-162
gi|118616993|ref|YP_905325.1|  transcriptional regulatory protein...   573    1e-161
gi|254821973|ref|ZP_05226974.1|  transcriptional regulatory prote...   569    3e-160
gi|240170096|ref|ZP_04748755.1|  transcriptional regulatory prote...   565    3e-159
gi|296166148|ref|ZP_06848593.1|  type 12 methyltransferase [Mycob...   553    1e-155
gi|342857283|ref|ZP_08713939.1|  transcriptional regulator [Mycob...   553    1e-155
gi|118467154|ref|YP_881391.1|  transcriptional regulator [Mycobac...   536    1e-150
gi|108800344|ref|YP_640541.1|  type 11 methyltransferase [Mycobac...   524    8e-147
gi|41408105|ref|NP_960941.1|  hypothetical protein MAP2007c [Myco...   513    1e-143
gi|118467962|ref|YP_888613.1|  transcriptional regulatory protein...   506    3e-141
gi|120404724|ref|YP_954553.1|  type 12 methyltransferase [Mycobac...   496    2e-138
gi|145223355|ref|YP_001134033.1|  type 11 methyltransferase [Myco...   496    3e-138
gi|315443814|ref|YP_004076693.1|  methylase involved in ubiquinon...   496    3e-138
gi|333991283|ref|YP_004523897.1|  transcriptional regulator [Myco...   471    9e-131
gi|169631815|ref|YP_001705464.1|  hypothetical protein MAB_4742c ...   457    1e-126
gi|333920226|ref|YP_004493807.1|  putative transcriptional regula...   392    6e-107
gi|283779141|ref|YP_003369896.1|  type 11 methyltransferase [Pire...   385    7e-105
gi|254426123|ref|ZP_05039840.1|  Methyltransferase domain family ...   385    7e-105
gi|220906755|ref|YP_002482066.1|  type 12 methyltransferase [Cyan...   375    4e-102
gi|297196406|ref|ZP_06913804.1|  methyltransferase type 11 [Strep...   375    5e-102
gi|220916750|ref|YP_002492054.1|  type 12 methyltransferase [Anae...   371    1e-100
gi|116670591|ref|YP_831524.1|  methyltransferase type 12 [Arthrob...   370    1e-100
gi|161528965|ref|YP_001582791.1|  methyltransferase type 11 [Nitr...   368    8e-100
gi|149174180|ref|ZP_01852808.1|  hypothetical protein PM8797T_133...   367    1e-99 
gi|239990341|ref|ZP_04711005.1|  putative methyltransferase [Stre...   367    2e-99 
gi|182436334|ref|YP_001824053.1|  putative methyltransferase [Str...   366    3e-99 
gi|326776958|ref|ZP_08236223.1|  Methyltransferase type 12 [Strep...   365    4e-99 
gi|148360151|ref|YP_001251358.1|  transcriptional regulator [Legi...   363    2e-98 
gi|52842605|ref|YP_096404.1|  transcriptional regulator [Legionel...   361    8e-98 
gi|258652793|ref|YP_003201949.1|  type 12 methyltransferase [Naka...   360    2e-97 
gi|54295236|ref|YP_127651.1|  hypothetical protein lpl2319 [Legio...   360    2e-97 
gi|54298398|ref|YP_124767.1|  hypothetical protein lpp2462 [Legio...   360    2e-97 
gi|172035610|ref|YP_001802111.1|  hypothetical protein cce_0694 [...   360    2e-97 
gi|307611249|emb|CBX00904.1|  hypothetical protein LPW_26071 [Leg...   359    3e-97 
gi|15827949|ref|NP_302212.1|  transcriptional regulator [Mycobact...   355    9e-96 
gi|220912550|ref|YP_002487859.1|  type 11 methyltransferase [Arth...   352    4e-95 
gi|256394886|ref|YP_003116450.1|  methyltransferase type 11 [Cate...   352    6e-95 
gi|153006766|ref|YP_001381091.1|  type 11 methyltransferase [Anae...   346    4e-93 
gi|119963127|ref|YP_947427.1|  hypothetical protein AAur_1664 [Ar...   344    1e-92 
gi|307545541|ref|YP_003898020.1|  transcriptional regulator [Halo...   342    5e-92 
gi|88813318|ref|ZP_01128557.1|  hypothetical protein NB231_07462 ...   340    3e-91 
gi|87308780|ref|ZP_01090919.1|  hypothetical protein DSM3645_1109...   332    5e-89 
gi|89056202|ref|YP_511653.1|  type 12 methyltransferase [Jannasch...   330    2e-88 
gi|256823407|ref|YP_003147370.1|  type 11 methyltransferase [Kang...   307    2e-81 
gi|220935738|ref|YP_002514637.1|  type 11 methyltransferase [Thio...   306    4e-81 
gi|110633855|ref|YP_674063.1|  methyltransferase type 11 [Mesorhi...   296    3e-78 


>gi|15609395|ref|NP_216774.1| transcriptional regulator [Mycobacterium tuberculosis H37Rv]
 gi|15841750|ref|NP_336787.1| methyltransferase-related protein [Mycobacterium tuberculosis 
CDC1551]
 gi|31793438|ref|NP_855931.1| transcriptional regulator [Mycobacterium bovis AF2122/97]
 74 more sequence titles
 Length=353

 Score =  715 bits (1845),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 353/353 (100%), Positives = 353/353 (100%), Gaps = 0/353 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER
Sbjct  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV
Sbjct  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC
Sbjct  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD
Sbjct  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300
            VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM
Sbjct  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300

Query  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK
Sbjct  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353


>gi|340627265|ref|YP_004745717.1| putative transcriptional regulatory protein [Mycobacterium canettii 
CIPT 140010059]
 gi|340005455|emb|CCC44615.1| putative transcriptional regulatory protein [Mycobacterium canettii 
CIPT 140010059]
Length=353

 Score =  711 bits (1836),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 351/353 (99%), Positives = 352/353 (99%), Gaps = 0/353 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER
Sbjct  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV
Sbjct  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC
Sbjct  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            GSGRAV LMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD
Sbjct  181  GSGRAVNLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300
            VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM
Sbjct  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300

Query  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            HCMTVSLALDGAGLGTVWGRQLATSMLA+AGFTDVTVAEIESDVLNNYYIARK
Sbjct  301  HCMTVSLALDGAGLGTVWGRQLATSMLANAGFTDVTVAEIESDVLNNYYIARK  353


>gi|289754365|ref|ZP_06513743.1| transcriptional regulator [Mycobacterium tuberculosis EAS054]
 gi|289694952|gb|EFD62381.1| transcriptional regulator [Mycobacterium tuberculosis EAS054]
Length=353

 Score =  707 bits (1826),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 350/353 (99%), Positives = 351/353 (99%), Gaps = 0/353 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            MS A ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER
Sbjct  1    MSRAGETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV
Sbjct  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC
Sbjct  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD
Sbjct  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300
            VITVFDAIHDQAQPARVLQNIYRALRPGGVLL+VDIKASSQLEDNVGVPLSTYLYTTSLM
Sbjct  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLLVDIKASSQLEDNVGVPLSTYLYTTSLM  300

Query  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK
Sbjct  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353


>gi|289447891|ref|ZP_06437635.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A]
 gi|289420849|gb|EFD18050.1| transcriptional regulator [Mycobacterium tuberculosis CPHL_A]
Length=307

 Score =  580 bits (1495),  Expect = 1e-163, Method: Compositional matrix adjust.
 Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER
Sbjct  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV
Sbjct  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC
Sbjct  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD
Sbjct  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVG  287
            VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVG
Sbjct  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVG  287


>gi|183983339|ref|YP_001851630.1| transcriptional regulatory protein [Mycobacterium marinum M]
 gi|183176665|gb|ACC41775.1| transcriptional regulatory protein [Mycobacterium marinum M]
Length=356

 Score =  575 bits (1482),  Expect = 4e-162, Method: Compositional matrix adjust.
 Identities = 272/353 (78%), Positives = 309/353 (88%), Gaps = 0/353 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            + G  ETTEEFG R VAAIDSAGL IL+SVGHQTGLLD ++ LPP+TS +IAEA GL+ER
Sbjct  4    IDGGTETTEEFGGRIVAAIDSAGLTILLSVGHQTGLLDVISQLPPSTSTQIAEAVGLDER  63

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLGGMT GQ++EYDA ++TYSLP HRA MLTRAAGP+NLA + QF+SLLGEVEQKV
Sbjct  64   YVREWLGGMTAGQVIEYDAETATYSLPEHRAAMLTRAAGPNNLARVTQFISLLGEVEQKV  123

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            I CFREGGGV Y++YPRFH LMAEMSG VFD+AL+DV++PLV+GLP+RL++GA+ ADFGC
Sbjct  124  IACFREGGGVHYTQYPRFHTLMAEMSGEVFDSALVDVIVPLVEGLPERLQAGAEAADFGC  183

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            GSG AV L+AQAF  SRFTGIDFS+ A+AA ++EA R GL+NATF+  DL  LD VG YD
Sbjct  184  GSGHAVNLLAQAFPKSRFTGIDFSEPAIAAASQEAKRRGLSNATFQSRDLTTLDDVGVYD  243

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300
            VIT FD IHDQAQPARVL+NIYRALRPGGVLLMVD+KASS+LEDNVG P+STYLYT S+M
Sbjct  244  VITAFDTIHDQAQPARVLENIYRALRPGGVLLMVDVKASSRLEDNVGNPMSTYLYTISMM  303

Query  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            HCMTVSLALDG GLGTVWG QLAT MLADAGF DVTVAEIESD LNNYYIARK
Sbjct  304  HCMTVSLALDGVGLGTVWGSQLATKMLADAGFEDVTVAEIESDPLNNYYIARK  356


>gi|118616993|ref|YP_905325.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
 gi|118569103|gb|ABL03854.1| transcriptional regulatory protein [Mycobacterium ulcerans Agy99]
Length=356

 Score =  573 bits (1478),  Expect = 1e-161, Method: Compositional matrix adjust.
 Identities = 272/353 (78%), Positives = 309/353 (88%), Gaps = 0/353 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            + G  ETTEEFG R VAAIDSAGL IL+SVGHQTGLLD ++ LPP+TS +IAEA GL+ER
Sbjct  4    IDGGTETTEEFGGRIVAAIDSAGLTILLSVGHQTGLLDVISQLPPSTSAQIAEAVGLDER  63

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLGGMT GQ++EYDA ++TYSLP HRA MLTRAAGP+NLA + QF+SLLGEVEQKV
Sbjct  64   YVREWLGGMTAGQVIEYDAETATYSLPEHRAAMLTRAAGPNNLARVTQFISLLGEVEQKV  123

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            I CFREGGGV Y++YPRFH LMAEMSG VFD+AL+DV++PLV+ LP+RL++GA+VADFGC
Sbjct  124  IACFREGGGVHYTQYPRFHTLMAEMSGEVFDSALVDVIVPLVESLPERLQAGAEVADFGC  183

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            GSG AV L+AQAF  SRFTGIDFS+ A+AA ++EA R GL+NATF+  DL  LD VG YD
Sbjct  184  GSGHAVNLLAQAFPKSRFTGIDFSEPAIAAASQEAQRRGLSNATFQSRDLTTLDDVGVYD  243

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300
            VIT FD IHDQAQPARVL+NIYRALRPGGVLLMVD+KASS+LEDNVG P+STYLYT S+M
Sbjct  244  VITAFDTIHDQAQPARVLENIYRALRPGGVLLMVDVKASSRLEDNVGNPMSTYLYTISMM  303

Query  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            HCMTVSLALDG GLGTVWG QLAT MLADAGF DVTVAEIESD LNNYYIARK
Sbjct  304  HCMTVSLALDGVGLGTVWGSQLATKMLADAGFEDVTVAEIESDPLNNYYIARK  356


>gi|254821973|ref|ZP_05226974.1| transcriptional regulatory protein [Mycobacterium intracellulare 
ATCC 13950]
Length=352

 Score =  569 bits (1466),  Expect = 3e-160, Method: Compositional matrix adjust.
 Identities = 273/350 (78%), Positives = 311/350 (89%), Gaps = 0/350 (0%)

Query  4    ALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVR  63
            A ETTEEF  R  A +D A L IL+S+GHQTGLLDTMAGLPP+TS +IA+AAGL+ERYVR
Sbjct  3    ARETTEEFTERIAATLDGASLTILLSIGHQTGLLDTMAGLPPSTSAQIADAAGLDERYVR  62

Query  64   EWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRC  123
            EWLGGMTTG++VEYDA ++TYSLPAHRAG+LTRAAG  NLAV+AQF+ LLGEVEQK+I C
Sbjct  63   EWLGGMTTGRVVEYDADTATYSLPAHRAGVLTRAAGAQNLAVVAQFLPLLGEVEQKIIGC  122

Query  124  FREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSG  183
            FR GGG+PYSE+PRFH+LMAE SG ++DA+L+DVVLPLVDGL +RLR+GADVADFGCGSG
Sbjct  123  FRAGGGLPYSEFPRFHQLMAEESGAMYDASLVDVVLPLVDGLVERLRAGADVADFGCGSG  182

Query  184  RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVIT  243
             A+ +MAQAF ASRFTGIDFS++A+A G  EAA  GL NATFE HDL+ELDK  AYDVIT
Sbjct  183  HAINVMAQAFPASRFTGIDFSEQAIATGIREAADRGLTNATFESHDLSELDKPEAYDVIT  242

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
            VFDAIHDQA+PARVL+NIYRALRPGGVLLM DIKASS+LE+NVGVP+STYLYTTSLMHCM
Sbjct  243  VFDAIHDQARPARVLENIYRALRPGGVLLMADIKASSRLEENVGVPMSTYLYTTSLMHCM  302

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            TVSLALDGAGLGT WG QLA +ML DAGF DV VAEIE+D +NNYYIARK
Sbjct  303  TVSLALDGAGLGTAWGTQLAVAMLGDAGFDDVRVAEIEADPINNYYIARK  352


>gi|240170096|ref|ZP_04748755.1| transcriptional regulatory protein [Mycobacterium kansasii ATCC 
12478]
Length=380

 Score =  565 bits (1457),  Expect = 3e-159, Method: Compositional matrix adjust.
 Identities = 284/352 (81%), Positives = 309/352 (88%), Gaps = 4/352 (1%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            ET+EEFGNR VAAIDSAGLAIL+SVGHQTGLLD MA LPP+TS +IAEAAGL ERYVREW
Sbjct  29   ETSEEFGNRIVAAIDSAGLAILLSVGHQTGLLDRMAELPPSTSAQIAEAAGLNERYVREW  88

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LGG+T  Q+V+YD   +TY+LPAHRA  LTRAAGP+NLA + QF+SLLGEVEQKVI CFR
Sbjct  89   LGGVTAAQVVDYDPEKATYALPAHRAAALTRAAGPNNLARVTQFISLLGEVEQKVIDCFR  148

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             GGGVPYS+YPRFH LMAEMSG VFDA L+DVVLP+VDGLP+RLR+GA+VADFGCGSG A
Sbjct  149  AGGGVPYSDYPRFHTLMAEMSGEVFDATLVDVVLPMVDGLPERLRAGAEVADFGCGSGHA  208

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKV----GAYDV  241
            V LMAQAF  SRFTGIDFSD AVAAG  EAARLGL NA FERHDLA LDKV     AYDV
Sbjct  209  VNLMAQAFPRSRFTGIDFSDAAVAAGAAEAARLGLNNAAFERHDLAHLDKVPEKTAAYDV  268

Query  242  ITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMH  301
            IT FD IHDQAQPARVL NI+RALRPGGVLLMVDIKASS+LE+N+GVPLSTYLYTTS+MH
Sbjct  269  ITAFDTIHDQAQPARVLANIHRALRPGGVLLMVDIKASSRLEENIGVPLSTYLYTTSMMH  328

Query  302  CMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            CMTVSLAL+G GLGTVWGRQ+ATSMLA AGF DV V EIESD LNNYYIARK
Sbjct  329  CMTVSLALEGVGLGTVWGRQVATSMLAAAGFGDVQVREIESDPLNNYYIARK  380


>gi|296166148|ref|ZP_06848593.1| type 12 methyltransferase [Mycobacterium parascrofulaceum ATCC 
BAA-614]
 gi|295898557|gb|EFG78118.1| type 12 methyltransferase [Mycobacterium parascrofulaceum ATCC 
BAA-614]
Length=356

 Score =  553 bits (1426),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 269/350 (77%), Positives = 303/350 (87%), Gaps = 0/350 (0%)

Query  4    ALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVR  63
            A ET++EF  R  AAID A L +L+S+GHQTGLLDTMAGL  ATS +IAEAAGL ERYVR
Sbjct  7    ASETSKEFAGRIAAAIDGASLTLLLSIGHQTGLLDTMAGLARATSAQIAEAAGLNERYVR  66

Query  64   EWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRC  123
            EWL GMTTG++V+YDA S TYSLPAHRAG+LTRAAGPDNLA++A FV  L EVEQK+I C
Sbjct  67   EWLAGMTTGRVVDYDAESGTYSLPAHRAGVLTRAAGPDNLALVALFVPQLAEVEQKIIGC  126

Query  124  FREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSG  183
            FR+GGG+ Y E+PRFH LMAE SG+V+D AL+D VLPLVDGL +RLRSG DVADFGCGSG
Sbjct  127  FRDGGGLHYGEFPRFHALMAEQSGVVYDKALVDTVLPLVDGLVERLRSGVDVADFGCGSG  186

Query  184  RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVIT  243
             A+ +MA+AF ASRFTG+DFSDEA+A G  EAA LGLANATFE  +LAELD+  AYDVIT
Sbjct  187  HAINVMARAFPASRFTGVDFSDEAIAVGAREAADLGLANATFEAQNLAELDRPDAYDVIT  246

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
            VFDAIHDQAQPARVL+NIYRALRPGGVLLM DIKASS+LE+NVGVP+STYLYTTSLMHCM
Sbjct  247  VFDAIHDQAQPARVLENIYRALRPGGVLLMADIKASSRLEENVGVPMSTYLYTTSLMHCM  306

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            TVSLALDGAGLG  WG QLAT+ML DAGF DV VAEI+SD +NNYYIARK
Sbjct  307  TVSLALDGAGLGAAWGEQLATAMLGDAGFDDVRVAEIDSDPINNYYIARK  356


>gi|342857283|ref|ZP_08713939.1| transcriptional regulator [Mycobacterium colombiense CECT 3035]
 gi|342134616|gb|EGT87782.1| transcriptional regulator [Mycobacterium colombiense CECT 3035]
Length=352

 Score =  553 bits (1426),  Expect = 1e-155, Method: Compositional matrix adjust.
 Identities = 267/350 (77%), Positives = 298/350 (86%), Gaps = 0/350 (0%)

Query  4    ALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVR  63
            ALETTEEF  R  AAID A L +L+S+GHQTGLLDTMAG  PATS +IA +AGL ERYVR
Sbjct  3    ALETTEEFTERITAAIDGASLTLLLSIGHQTGLLDTMAGHAPATSEQIATSAGLNERYVR  62

Query  64   EWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRC  123
            EWL GMTTG++V+YD  ++TYSLP  RA +LTR AGPDNLA++   V +L EVEQK+I C
Sbjct  63   EWLAGMTTGRVVDYDPDTATYSLPPQRAKVLTREAGPDNLALVTLLVPVLAEVEQKIIGC  122

Query  124  FREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSG  183
            FR GGG+PYSE+PRFH LMAE SG V+D AL+DVVLPLVDGL  RLRSGADVADFGCGSG
Sbjct  123  FRAGGGLPYSEFPRFHALMAEQSGAVYDTALVDVVLPLVDGLVQRLRSGADVADFGCGSG  182

Query  184  RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVIT  243
             A+ +MAQAF ASRFTGIDFS++A+A G  EAA  GL+NA FE H+LA+LDK   YDVIT
Sbjct  183  HAINVMAQAFPASRFTGIDFSEQAIATGIAEAAERGLSNAAFESHNLADLDKADTYDVIT  242

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
            VFDAIHDQAQPARVLQNIYRALRPGGVLLM DIKASS+LEDNVGVP+STYLYTTSLMHCM
Sbjct  243  VFDAIHDQAQPARVLQNIYRALRPGGVLLMADIKASSRLEDNVGVPMSTYLYTTSLMHCM  302

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            TVSLALDGAGLGT WG QLA SML DAGF DV+VAEIESD +NNYYIARK
Sbjct  303  TVSLALDGAGLGTAWGTQLAVSMLGDAGFGDVSVAEIESDPINNYYIARK  352


>gi|118467154|ref|YP_881391.1| transcriptional regulator [Mycobacterium avium 104]
 gi|254774892|ref|ZP_05216408.1| transcriptional regulatory protein [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|118168441|gb|ABK69338.1| possible transcriptional regulatory protein [Mycobacterium avium 
104]
Length=353

 Score =  536 bits (1382),  Expect = 1e-150, Method: Compositional matrix adjust.
 Identities = 267/350 (77%), Positives = 302/350 (87%), Gaps = 0/350 (0%)

Query  4    ALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVR  63
            ALETT+EF +R  AAID A LA+L+S+GHQT LLDTMAGLPPATS  IAEAAGL ERYVR
Sbjct  3    ALETTDEFTDRITAAIDGASLALLLSIGHQTALLDTMAGLPPATSDRIAEAAGLNERYVR  62

Query  64   EWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRC  123
            EWL GMTTG++V+Y   ++ YSLPAHRA +LTRAAGPDNLA++A F+ LL EVEQK+I C
Sbjct  63   EWLAGMTTGRVVDYHPATAEYSLPAHRAKVLTRAAGPDNLALVALFLPLLAEVEQKIIGC  122

Query  124  FREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSG  183
            FR GGG+PY+E+PRFH LMAE SG+VFD AL+DVVLPLVDGL   LR GADVADFGCGSG
Sbjct  123  FRTGGGLPYTEFPRFHALMAEQSGVVFDTALVDVVLPLVDGLVPWLRRGADVADFGCGSG  182

Query  184  RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVIT  243
             A+ +MAQAF ASRFTGIDFS+ A+AAG  EAA  GLANA+FE H+LA+LD+  AYD+IT
Sbjct  183  HAINVMAQAFPASRFTGIDFSEHAIAAGIAEAAERGLANASFESHNLADLDRADAYDLIT  242

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
            VFDAIHDQAQPARVL NI+RALRPGGVLLM DIKASS+LEDNVGVP+STYLYTTSLMHCM
Sbjct  243  VFDAIHDQAQPARVLANIHRALRPGGVLLMADIKASSRLEDNVGVPMSTYLYTTSLMHCM  302

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            TVSLA DGAGLGT WG QLA +ML +AGF DV VAEIESD +NNYYIARK
Sbjct  303  TVSLAADGAGLGTAWGTQLAVAMLGEAGFADVRVAEIESDPINNYYIARK  352


>gi|108800344|ref|YP_640541.1| type 11 methyltransferase [Mycobacterium sp. MCS]
 gi|119869472|ref|YP_939424.1| type 11 methyltransferase [Mycobacterium sp. KMS]
 gi|126435967|ref|YP_001071658.1| type 11 methyltransferase [Mycobacterium sp. JLS]
 gi|108770763|gb|ABG09485.1| Methyltransferase type 11 [Mycobacterium sp. MCS]
 gi|119695561|gb|ABL92634.1| Methyltransferase type 11 [Mycobacterium sp. KMS]
 gi|126235767|gb|ABN99167.1| Methyltransferase type 11 [Mycobacterium sp. JLS]
Length=355

 Score =  524 bits (1350),  Expect = 8e-147, Method: Compositional matrix adjust.
 Identities = 253/347 (73%), Positives = 285/347 (83%), Gaps = 0/347 (0%)

Query  7    TTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWL  66
            +TE+F  R V AIDSA L IL+S+GHQTGL DT+A LPPATS +IA+AAGL+ERYVREWL
Sbjct  9    STEQFAERIVGAIDSASLTILLSIGHQTGLFDTLAQLPPATSTQIADAAGLDERYVREWL  68

Query  67   GGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFRE  126
            GG    ++V+YDA + TYSLP   A +LTRAAGPDNLA +AQF+ LLGEVEQK+I CFR 
Sbjct  69   GGTVAARVVDYDAAAQTYSLPPTHAAVLTRAAGPDNLARVAQFIPLLGEVEQKIIECFRH  128

Query  127  GGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAV  186
            GGG+PYS YPRFH LMAE SG VFDAAL+DV+LP+ DGLP RL +G DVAD GCGSG A+
Sbjct  129  GGGLPYSAYPRFHTLMAEESGEVFDAALVDVILPMADGLPARLAAGVDVADIGCGSGHAI  188

Query  187  KLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFD  246
             +MAQAF ASRFTGIDFSDE +  G  EA RLGL NA F   D+A LD V AYDVITVFD
Sbjct  189  NVMAQAFPASRFTGIDFSDEGLGVGRAEAQRLGLQNAQFVAADVATLDAVEAYDVITVFD  248

Query  247  AIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVS  306
            AIHDQAQPARVL NI RALRPGGV LMVDIKASS+LEDNVGVP++ YLYT S MHCM+VS
Sbjct  249  AIHDQAQPARVLANIQRALRPGGVFLMVDIKASSRLEDNVGVPMAPYLYTVSTMHCMSVS  308

Query  307  LALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            L LDGAGLGT WGRQLATSMLADAGFT+V V EI+SD LN YY+ RK
Sbjct  309  LGLDGAGLGTCWGRQLATSMLADAGFTEVDVREIDSDPLNFYYVCRK  355


>gi|41408105|ref|NP_960941.1| hypothetical protein MAP2007c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|41396460|gb|AAS04324.1| hypothetical protein MAP_2007c [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|336461782|gb|EGO40640.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=353

 Score =  513 bits (1322),  Expect = 1e-143, Method: Compositional matrix adjust.
 Identities = 262/350 (75%), Positives = 300/350 (86%), Gaps = 0/350 (0%)

Query  4    ALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVR  63
            ALETT+EF +R  AAID A LA+L+S+GHQTGLLDTMAG+PPATS  IAEAAGL ERYVR
Sbjct  3    ALETTDEFTDRITAAIDGASLALLLSIGHQTGLLDTMAGVPPATSDRIAEAAGLNERYVR  62

Query  64   EWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRC  123
            EWL GMTTG++V+Y   ++ YSLPAHRA +LTRAAGPDNLA++A F+ LL EVEQK+I C
Sbjct  63   EWLAGMTTGRVVDYHPATAEYSLPAHRAKVLTRAAGPDNLALVALFLPLLAEVEQKIIGC  122

Query  124  FREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSG  183
            FR GGG+PY+E+PRFH LMAE SG+VFD AL+DVVLPLVDGL  RLR G DVADFGCGSG
Sbjct  123  FRTGGGLPYTEFPRFHALMAEQSGVVFDTALVDVVLPLVDGLVPRLRRGVDVADFGCGSG  182

Query  184  RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVIT  243
             A+ +MAQAF ASRFTGIDFS+ A+AAG  EAA  GLAN +FE  +LA+LD+  AYD+IT
Sbjct  183  HAINVMAQAFPASRFTGIDFSEHAIAAGIAEAAERGLANVSFESRNLADLDRADAYDLIT  242

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
            VFDAIHDQAQPARVL NI+RALRPGGVLLM D+KASS+LEDN+GVP+STYLYTTSLMHCM
Sbjct  243  VFDAIHDQAQPARVLANIHRALRPGGVLLMADVKASSRLEDNIGVPMSTYLYTTSLMHCM  302

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            TVSLA  GAGLGT WG QLA +ML +AGF DV VAEIESD +NNYYIARK
Sbjct  303  TVSLAAGGAGLGTAWGTQLAVAMLGEAGFADVRVAEIESDPINNYYIARK  352


>gi|118467962|ref|YP_888613.1| transcriptional regulatory protein [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169249|gb|ABK70145.1| possible transcriptional regulatory protein [Mycobacterium smegmatis 
str. MC2 155]
Length=365

 Score =  506 bits (1302),  Expect = 3e-141, Method: Compositional matrix adjust.
 Identities = 240/345 (70%), Positives = 282/345 (82%), Gaps = 0/345 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E+F  R V  +DSA  AIL+S+GHQTGL DTM  LPPATS +IA+AAGL ERYVREWLGG
Sbjct  20   EDFAARVVECLDSASTAILLSIGHQTGLFDTMRSLPPATSTQIADAAGLNERYVREWLGG  79

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            +   +++EY     TY LP HRA MLTRAAGPDNLA +AQF+ LL EVEQK++  FR GG
Sbjct  80   LVAAKVIEYAPDERTYHLPEHRAAMLTRAAGPDNLARVAQFIPLLAEVEQKIVDRFRHGG  139

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            G+PYSEYPRFH+LMAE SG VFDAALIDV+LP+  GL DRL++GAD+AD GCGSG AV +
Sbjct  140  GLPYSEYPRFHRLMAEQSGEVFDAALIDVILPMASGLVDRLQAGADLADIGCGSGHAVNV  199

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            +AQAF ASR TGIDFS+E +A G +EA RLGL NATF   D+AELD+  AYDVIT FDAI
Sbjct  200  IAQAFPASRCTGIDFSEEGLATGRDEAQRLGLDNATFIARDVAELDETEAYDVITAFDAI  259

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HDQA PARVL+NI+RALRPGGV LMVDIKAS+ +E+N+GVP + YLYT S +HCMTVSLA
Sbjct  260  HDQAHPARVLENIHRALRPGGVFLMVDIKASTHVENNIGVPFAPYLYTVSTLHCMTVSLA  319

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            LDG GLGTVWGR+LATSMLADAGF D+ V EI++D +N YY+ARK
Sbjct  320  LDGDGLGTVWGRELATSMLADAGFDDIVVREIDTDPINYYYVARK  364


>gi|120404724|ref|YP_954553.1| type 12 methyltransferase [Mycobacterium vanbaalenii PYR-1]
 gi|119957542|gb|ABM14547.1| Methyltransferase type 12 [Mycobacterium vanbaalenii PYR-1]
Length=376

 Score =  496 bits (1277),  Expect = 2e-138, Method: Compositional matrix adjust.
 Identities = 247/350 (71%), Positives = 281/350 (81%), Gaps = 0/350 (0%)

Query  4    ALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVR  63
            A ETTEEF  R V  ID A +AIL+S+GHQTGL DT+A LPPATS +IA+AAGL+ERYVR
Sbjct  27   APETTEEFAERIVGTIDGASIAILLSIGHQTGLFDTLAQLPPATSTQIADAAGLDERYVR  86

Query  64   EWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRC  123
            EWLGGM  G+IV+YDA +  YSLP HRA +LTRAAGPDN A +AQF+ LLGEVEQKVI C
Sbjct  87   EWLGGMVAGRIVDYDAAAQAYSLPPHRAAVLTRAAGPDNFARVAQFIPLLGEVEQKVIGC  146

Query  124  FREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSG  183
            F  GGG+ Y+EYPRFH LMAE SG VFDAAL+DV+LP+VDGLP RLRSG DVADFGCGSG
Sbjct  147  FHNGGGLSYAEYPRFHTLMAEESGEVFDAALVDVILPMVDGLPARLRSGVDVADFGCGSG  206

Query  184  RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVIT  243
             AV +MA AF ASRF G+DFS+E +AAG  E+  LGL NATF   D+A+ D V A+D+IT
Sbjct  207  HAVNVMASAFPASRFVGLDFSEEGLAAGVAESRDLGLTNATFAATDVADYDAVDAFDLIT  266

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
             FD+IHDQA P RVL NI RALRPGG  LMVDIK+SS++EDNVG PL+ YLYT S MHCM
Sbjct  267  AFDSIHDQAHPGRVLANIQRALRPGGTFLMVDIKSSSRVEDNVGAPLAPYLYTVSTMHCM  326

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            +VSL L G GLGT WGR LATSMLADAGF DV V EI+SD LN YYIA K
Sbjct  327  SVSLGLGGDGLGTCWGRDLATSMLADAGFRDVQVREIDSDPLNLYYIATK  376


>gi|145223355|ref|YP_001134033.1| type 11 methyltransferase [Mycobacterium gilvum PYR-GCK]
 gi|145215841|gb|ABP45245.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
Length=360

 Score =  496 bits (1276),  Expect = 3e-138, Method: Compositional matrix adjust.
 Identities = 242/348 (70%), Positives = 284/348 (82%), Gaps = 0/348 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            ETTEEF  R V A+D+A LA+LVS+GHQT L DTMA LPP+TS +IA+AAGL ERYVREW
Sbjct  13   ETTEEFAQRIVGALDAASLALLVSIGHQTHLFDTMANLPPSTSTQIADAAGLNERYVREW  72

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LGG+  G+IV+YD  + T+SLPAHRA +LTR AGPDNLA + QF+ LL EVEQKVI CFR
Sbjct  73   LGGVAAGRIVDYDPAAQTFSLPAHRAAVLTRTAGPDNLARVTQFIPLLSEVEQKVIACFR  132

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
            +GGG+ Y+EYPRFH LMAE SG VFDAAL+D +LP+ +GL DRLR G DVADFGCGSG A
Sbjct  133  DGGGLSYAEYPRFHTLMAEQSGEVFDAALVDGILPMAEGLTDRLRQGVDVADFGCGSGHA  192

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            V +MA+AF ASRFTGIDFS+E +AAG +EA RLGL NA+F   D+A  D   ++DVIT F
Sbjct  193  VNVMAKAFPASRFTGIDFSEEGLAAGRDEARRLGLTNASFNATDVATYDAAESFDVITAF  252

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            DAIHDQA PARVL NI+ ALRPGG  LMVDIK+SS+LE+N+GVP + YLYT S MHCM+V
Sbjct  253  DAIHDQAHPARVLANIHAALRPGGTFLMVDIKSSSRLENNIGVPFAPYLYTVSAMHCMSV  312

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            SL LDG GLGT WGR++AT+MLADAGF DV V EIESD +N YYIARK
Sbjct  313  SLGLDGDGLGTCWGREVATTMLADAGFGDVQVREIESDPINYYYIARK  360


>gi|315443814|ref|YP_004076693.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium 
sp. Spyr1]
 gi|315262117|gb|ADT98858.1| methylase involved in ubiquinone/menaquinone biosynthesis [Mycobacterium 
sp. Spyr1]
Length=360

 Score =  496 bits (1276),  Expect = 3e-138, Method: Compositional matrix adjust.
 Identities = 242/348 (70%), Positives = 284/348 (82%), Gaps = 0/348 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            ETTEEF  R V A+D+A LA+LVS+GHQT L DTMA LPP+TS +IA+AAGL ERYVREW
Sbjct  13   ETTEEFAQRIVGALDAASLALLVSIGHQTHLFDTMANLPPSTSTQIADAAGLNERYVREW  72

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LGG+  G+IV+YD  + T+SLPAHRA +LTR AGPDNLA + QF+ LL EVEQKVI CFR
Sbjct  73   LGGVAAGRIVDYDPAAQTFSLPAHRAAVLTRTAGPDNLARVTQFIPLLSEVEQKVIACFR  132

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
            +GGG+ Y+EYPRFH LMAE SG VFDAAL+D +LP+ +GL DRLR G DVADFGCGSG A
Sbjct  133  DGGGLSYAEYPRFHTLMAEESGEVFDAALVDGILPMAEGLTDRLRQGVDVADFGCGSGHA  192

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            V +MA+AF ASRFTGIDFS+E +AAG +EA RLGL NA+F   D+A  D   ++DVIT F
Sbjct  193  VNVMAKAFPASRFTGIDFSEEGLAAGRDEARRLGLTNASFNATDVATYDAAESFDVITAF  252

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            DAIHDQA PARVL NI+ ALRPGG  LMVDIK+SS+LE+N+GVP + YLYT S MHCM+V
Sbjct  253  DAIHDQAHPARVLANIHSALRPGGTFLMVDIKSSSRLENNIGVPFAPYLYTVSAMHCMSV  312

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            SL LDG GLGT WGR++AT+MLADAGF DV V EIESD +N YYIARK
Sbjct  313  SLGLDGDGLGTCWGREVATTMLADAGFGDVQVREIESDPINYYYIARK  360


>gi|333991283|ref|YP_004523897.1| transcriptional regulator [Mycobacterium sp. JDM601]
 gi|333487251|gb|AEF36643.1| transcriptional regulatory protein [Mycobacterium sp. JDM601]
Length=364

 Score =  471 bits (1211),  Expect = 9e-131, Method: Compositional matrix adjust.
 Identities = 236/352 (68%), Positives = 281/352 (80%), Gaps = 4/352 (1%)

Query  6    ETTEE---FGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGL-PPATSMEIAEAAGLEERY  61
            E+TE+   F +R   A+D+A LA+L+S+GHQ+GL DTMAGL  PATS +IA+AAGL ERY
Sbjct  12   ESTEDAGAFADRIADALDAASLALLLSLGHQSGLFDTMAGLLAPATSAQIADAAGLNERY  71

Query  62   VREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVI  121
            VREWLGG+T   +++Y   ++TY LP HRA ++TRAAGP NLA +AQ+++LLGE EQ+V+
Sbjct  72   VREWLGGVTVAGVIDYHPATATYRLPEHRAAVVTRAAGPANLARVAQYIALLGEAEQQVL  131

Query  122  RCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCG  181
             CFR+GGG+ YSEYPRFH +MAE SG VFDAAL++VVLPLVDGLP RLR+GADVADFGCG
Sbjct  132  ACFRDGGGLAYSEYPRFHTVMAERSGEVFDAALVEVVLPLVDGLPQRLRAGADVADFGCG  191

Query  182  SGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDV  241
            SG AV +MAQ FG SRFTGIDFS E +A  + EA + GL NATFE HDL+  D+ G YD+
Sbjct  192  SGHAVNVMAQEFGNSRFTGIDFSAEGIARASREAEQRGLTNATFESHDLSTFDRSGVYDL  251

Query  242  ITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMH  301
            +T FDAIHDQAQPA VL+NI+R+LRPGG+LLM D KASS LEDNVGV  +TY YT SLMH
Sbjct  252  VTAFDAIHDQAQPAPVLENIHRSLRPGGILLMADAKASSHLEDNVGVVTNTYRYTVSLMH  311

Query  302  CMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            CM VSL LDGAGLGT+WGRQLA SML DAGF DV   EI  D  N YYIA K
Sbjct  312  CMPVSLGLDGAGLGTMWGRQLAVSMLVDAGFADVEFTEIAEDPSNYYYIATK  363


>gi|169631815|ref|YP_001705464.1| hypothetical protein MAB_4742c [Mycobacterium abscessus ATCC 
19977]
 gi|169243782|emb|CAM64810.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=358

 Score =  457 bits (1176),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 228/348 (66%), Positives = 272/348 (79%), Gaps = 0/348 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            ETTEEF  R  AAID+A L +L+S+GHQTGLLDT+A    +TS ++A+AAGLEERYVREW
Sbjct  11   ETTEEFSERLTAAIDNAALVLLMSIGHQTGLLDTLAASAGSTSEQLADAAGLEERYVREW  70

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            L GMT   +V+Y+  S+ Y+LP+HRA  LTR AG +NLA +AQ++ LL EVEQK++ CFR
Sbjct  71   LAGMTVAHVVDYEPVSAIYTLPSHRAATLTREAGLNNLARLAQYLPLLSEVEQKILGCFR  130

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             GGG+ Y +YPRFH +M E S  VFD ALI  VLPLV+GLP+ L  G DVADFGCGSG A
Sbjct  131  RGGGLQYQDYPRFHAVMGERSREVFDKALIRTVLPLVEGLPEGLEGGLDVADFGCGSGYA  190

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            + LMAQAF ASRFTG+DFSDEA+A    +A RLGL NA+F   D+A L+    YD+IT F
Sbjct  191  INLMAQAFPASRFTGVDFSDEAIATAAADAERLGLRNASFLSADVATLNAPATYDLITAF  250

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            D IHDQA PA VL NI+RALRPGGVLLM DIKASS+LEDN+GV +STY YT SL HCM V
Sbjct  251  DTIHDQAHPAAVLANIHRALRPGGVLLMADIKASSRLEDNIGVAMSTYRYTVSLTHCMPV  310

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            SL L+GAGLGT+WGRQLA SMLA+AGF+DVTV EIE D  N +YIAR+
Sbjct  311  SLGLEGAGLGTMWGRQLAESMLAEAGFSDVTVREIEQDTSNYFYIARR  358


>gi|333920226|ref|YP_004493807.1| putative transcriptional regulator [Amycolicicoccus subflavus 
DQS3-9A1]
 gi|333482447|gb|AEF41007.1| Possible transcriptional regulatory protein [Amycolicicoccus 
subflavus DQS3-9A1]
Length=352

 Score =  392 bits (1006),  Expect = 6e-107, Method: Compositional matrix adjust.
 Identities = 186/330 (57%), Positives = 235/330 (72%), Gaps = 0/330 (0%)

Query  24   LAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMTTGQIVEYDAGSST  83
            L +++S+GHQ  L DT+   P ATS EIA+AAGL ERYVREWLG M  G IV YD  + T
Sbjct  20   LTLMISIGHQARLFDTLNDRPAATSEEIAQAAGLNERYVREWLGAMAVGGIVRYDPSAQT  79

Query  84   YSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGVPYSEYPRFHKLMA  143
            Y LP     +L+RAAGPDNLA +AQ + LL  VEQ+V++ FR GGGVPYSEY RFH+LMA
Sbjct  80   YVLPEEHGALLSRAAGPDNLATLAQMLPLLSTVEQQVLQSFRAGGGVPYSEYTRFHELMA  139

Query  144  EMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMAQAFGASRFTGIDF  203
            E+S    DAAL+ V++PLV G  +RL  G  VAD GCGSG A+ L+ + +  S FTG DF
Sbjct  140  ELSAATNDAALLPVIVPLVPGFHERLTDGISVADIGCGSGHALNLLGREYPRSTFTGFDF  199

Query  204  SDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHDQAQPARVLQNIYR  263
            ++EA++A   EA ++GL N  F   D++EL +   +DV+  FDAIHDQA PARVL  I+ 
Sbjct  200  AEEAISAAKREAHQMGLPNTVFIVRDVSELGEEDRFDVVFAFDAIHDQAHPARVLNQIFT  259

Query  264  ALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALDGAGLGTVWGRQLA  323
            AL+PGG  +MVDI+ASS+LEDN+  PL   LYT S  HCMTVSLAL G GLGT WG Q A
Sbjct  260  ALKPGGTFVMVDIRASSRLEDNLDHPLGVMLYTVSTAHCMTVSLALGGEGLGTAWGEQKA  319

Query  324  TSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            T ML +AGFTD+ +  ++ D+LN+YY+A K
Sbjct  320  TEMLTEAGFTDIEIKHVDQDILNSYYLASK  349


>gi|283779141|ref|YP_003369896.1| type 11 methyltransferase [Pirellula staleyi DSM 6068]
 gi|283437594|gb|ADB16036.1| Methyltransferase type 11 [Pirellula staleyi DSM 6068]
Length=361

 Score =  385 bits (988),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 189/352 (54%), Positives = 242/352 (69%), Gaps = 0/352 (0%)

Query  1    MSGALETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEER  60
            +S   ETTEEFG R +  I+++GL++++S+GH+TGL D M+ + PATS EIA   GL+ER
Sbjct  7    LSHTQETTEEFGERLLGVINASGLSMMLSIGHRTGLWDAMSQMDPATSTEIAARTGLQER  66

Query  61   YVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKV  120
            YVREWLG M TG++V+YDA +  Y LPAHRA +LTRA  P N+A   Q++S+LG VE +V
Sbjct  67   YVREWLGAMVTGKVVDYDAATQQYWLPAHRAALLTRAGAPSNMAATMQWISVLGSVEDEV  126

Query  121  IRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGC  180
            +  F++GGGV Y  + RFH++MAE S       L + +LPLVDGL  RL  G +V D GC
Sbjct  127  VERFQQGGGVHYCRFKRFHEVMAEESNQSTVGGLFEHILPLVDGLQARLEEGIEVLDVGC  186

Query  181  GSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYD  240
            G GRA+  +A+ F  S+FTG DFS+EA+ A T EAA   LAN  F   D A++D    YD
Sbjct  187  GRGRAMIALAERFPHSQFTGYDFSEEAIEAATREAAAKNLANIRFAVRDAAKIDDHRQYD  246

Query  241  VITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLM  300
            +IT FDAIHDQA+P  VL NI RAL  GGV LM DI ASS +E N+  PL  +LYT S M
Sbjct  247  LITAFDAIHDQARPDLVLANIARALLDGGVFLMQDITASSYVEKNIDHPLGPFLYTISTM  306

Query  301  HCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
            HCMTVSLA  G GLGT WG +LA  ML +AGF+   V  +  D++N+YYI R
Sbjct  307  HCMTVSLASGGMGLGTAWGEELACKMLKNAGFSLPEVKRLPHDIMNSYYIVR  358


>gi|254426123|ref|ZP_05039840.1| Methyltransferase domain family [Synechococcus sp. PCC 7335]
 gi|196188546|gb|EDX83511.1| Methyltransferase domain family [Synechococcus sp. PCC 7335]
Length=372

 Score =  385 bits (988),  Expect = 7e-105, Method: Compositional matrix adjust.
 Identities = 191/348 (55%), Positives = 238/348 (69%), Gaps = 0/348 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            +  E FG+R +  ++S  LA ++S+GH+TGLLDTMA L  +TS++IAEAAGL ERYVREW
Sbjct  25   KKAEAFGDRLLGMLNSGALASMLSIGHRTGLLDTMATLSASTSLQIAEAAGLNERYVREW  84

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            L  + TG+IV+YD+ S +YSLPA  A  LTR A P+NLA   QFV L+G VE  +I CF 
Sbjct  85   LAALVTGRIVDYDSVSRSYSLPAEHAAFLTRKASPNNLAATMQFVPLMGAVEDAIIDCFY  144

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             GGGVPYS Y RFH++MAE S     A L   +LP+V GL + L SG  VAD GCG GRA
Sbjct  145  HGGGVPYSAYTRFHEVMAEDSAQTVIAGLDTHILPMVPGLIETLASGISVADIGCGQGRA  204

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            ++ +A  F  SRF G DFS  A+A    E+ RL L N TFE  D A++ +   YD+I  F
Sbjct  205  IQKLAGMFPNSRFVGYDFSPGAIAWAKAESQRLNLENITFELQDAAQISEDSQYDLIFAF  264

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            DAIHDQAQP  VLQNI+RALRP GV LM DI+ASS LE+N+  P++  LY  S  HC  V
Sbjct  265  DAIHDQAQPETVLQNIHRALRPEGVYLMQDIRASSHLENNLDHPVAPLLYFISCHHCTAV  324

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            SLA  G GLGT+WG +LA  M+  AGFT + V ++E D  NNYY+ARK
Sbjct  325  SLAAGGPGLGTMWGEELALEMIEAAGFTRIEVKQLEHDFQNNYYLARK  372


>gi|220906755|ref|YP_002482066.1| type 12 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219863366|gb|ACL43705.1| Methyltransferase type 12 [Cyanothece sp. PCC 7425]
Length=365

 Score =  375 bits (964),  Expect = 4e-102, Method: Compositional matrix adjust.
 Identities = 180/345 (53%), Positives = 230/345 (67%), Gaps = 0/345 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E F    +   +S  L++++S+GH+TGL D +A LP ATS +IAE A L+ERYVREWL  
Sbjct  20   EAFAEELLNVFNSGALSLMISIGHRTGLFDALAALPSATSQQIAEQAKLQERYVREWLNA  79

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            M  GQIV YD  + TY LPA  A  LTR+A P+N+AV AQ++ +L  VE K+I CF  GG
Sbjct  80   MVVGQIVTYDPAAKTYQLPAEHAAFLTRSAAPNNMAVFAQYIPVLAGVEDKIIYCFHYGG  139

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            GVPYS++ RFH++MAE SG    AAL D +LPLV GL +RL+ G +V D GCGSGRA+  
Sbjct  140  GVPYSQFRRFHEVMAEDSGQTVVAALEDYILPLVPGLRERLQHGIEVLDVGCGSGRALNQ  199

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            +A  F  S FTG D S EA+A  T EA    L N  F   D  +L +V  YD IT FDAI
Sbjct  200  LASLFPQSHFTGYDLSKEAIATATTEAQHRQLTNVQFRVQDTTQLQEVEEYDWITTFDAI  259

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HDQA+P  VLQNIYRALR  GV LM DI A++ +E N+  P + +LY  S MHCMTVSLA
Sbjct  260  HDQARPDWVLQNIYRALRSDGVYLMQDIHAATAVEGNLDHPAAPFLYAVSCMHCMTVSLA  319

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
              G GLGT+WG++ A  +L  AGF+ + + ++  D +N+YYI  K
Sbjct  320  AGGMGLGTMWGQEKALELLRAAGFSQIEIKQLPHDPMNDYYIIHK  364


>gi|297196406|ref|ZP_06913804.1| methyltransferase type 11 [Streptomyces pristinaespiralis ATCC 
25486]
 gi|197720881|gb|EDY64789.1| methyltransferase type 11 [Streptomyces pristinaespiralis ATCC 
25486]
Length=360

 Score =  375 bits (964),  Expect = 5e-102, Method: Compositional matrix adjust.
 Identities = 194/349 (56%), Positives = 237/349 (68%), Gaps = 2/349 (0%)

Query  5    LETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVRE  64
            L   EEF    V  ++   LA+L+SVGHQTGL DT+AGLPP+TS EIAE+AGL+ERYVRE
Sbjct  13   LGRQEEFAGEVVDVLNKGALALLMSVGHQTGLFDTLAGLPPSTSDEIAESAGLDERYVRE  72

Query  65   WLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCF  124
            WLGGM  G I+EY+     Y LP   A  L  AAGPDNLA + Q+++L+GEVEQ+V+RCF
Sbjct  73   WLGGMVVGGILEYEPEHGRYVLPPEHAASLVAAAGPDNLAGMMQYIALMGEVEQQVVRCF  132

Query  125  REGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGR  184
            R+GGGVPYS YPRF  L AE +  V+D AL+D ++PLV  LP+RLR+G D  D G G G 
Sbjct  133  RDGGGVPYSAYPRFQALQAEETARVYDQALVDTIIPLVPDLPERLRAGIDALDVGTGQGH  192

Query  185  AVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITV  244
            A  ++A+AF  SRF G+D S+  V AG  EAARLGL N  F   D AE+   G YD+IT 
Sbjct  193  APVVLAKAFPRSRFHGLDQSEAGVEAGRAEAARLGLDNVRFLIGDSAEIS--GEYDLITA  250

Query  245  FDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMT  304
            FD IHD A P   L  I  +LR GG  LM DI ASS+LE NVG P    L+  S+ +CMT
Sbjct  251  FDVIHDLAGPDATLAAISGSLRQGGTFLMGDIAASSRLEKNVGHPFGPALFGFSVFYCMT  310

Query  305  VSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
             SL+  GAGLGTVWG++ A  ML +AGF  V V  +E D LN YY+ARK
Sbjct  311  TSLSTGGAGLGTVWGQETAVRMLNEAGFPRVDVRTVEGDPLNVYYVARK  359


>gi|220916750|ref|YP_002492054.1| type 12 methyltransferase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954604|gb|ACL64988.1| Methyltransferase type 12 [Anaeromyxobacter dehalogenans 2CP-1]
Length=365

 Score =  371 bits (952),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 188/345 (55%), Positives = 237/345 (69%), Gaps = 1/345 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            +  + FGNR V  +D AG A+++SVGH+TGL D MA LPPAT+ E+A  AGL+ERYVREW
Sbjct  17   DAVDAFGNRLVGMLDEAGAALMISVGHRTGLFDAMARLPPATAAELAHEAGLDERYVREW  76

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LG MTT ++VEYD     Y LPAH A +LTRAA P+N AV AQ+V+LLG VE +++ CFR
Sbjct  77   LGAMTTSRVVEYDPRGGQYRLPAHHASLLTRAATPNNFAVYAQYVALLGAVEDRIVECFR  136

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             G GVPYS + RFH++MAE SG     AL D ++ LV GL   L  G  V D GCGSGRA
Sbjct  137  SGSGVPYSAFHRFHEVMAEDSGQSVVGAL-DAIVALVPGLEHDLLDGISVLDVGCGSGRA  195

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            +  +A+A+  SRFTG DFS+EA+ A    AA   L N  F+  D A       YD+IT F
Sbjct  196  LTALARAYPRSRFTGHDFSEEAIRAARNVAAEHRLTNVEFDVRDAAGPVGEARYDLITAF  255

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            DAIHDQA PA VL+ I + L P G+ LM DI+ASS LE NV  PL+ +LY  S+MHCMTV
Sbjct  256  DAIHDQADPAAVLRGIRQRLAPDGIFLMQDIRASSALERNVEHPLAPFLYAVSVMHCMTV  315

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYI  350
            SLA  GAGLGT+WG + A +MLA+AGF +V+V  +  D+ N +Y+
Sbjct  316  SLAQGGAGLGTMWGEERARAMLAEAGFGEVSVHTLPHDIQNCFYV  360


>gi|116670591|ref|YP_831524.1| methyltransferase type 12 [Arthrobacter sp. FB24]
 gi|116610700|gb|ABK03424.1| Methyltransferase type 12 [Arthrobacter sp. FB24]
Length=369

 Score =  370 bits (951),  Expect = 1e-100, Method: Compositional matrix adjust.
 Identities = 194/340 (58%), Positives = 235/340 (70%), Gaps = 2/340 (0%)

Query  14   RFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMTTGQ  73
            R +  ++ +  A+L S+GHQTGL D MAGLPPA+S +IA+AAGL ERYVREWLGGM T +
Sbjct  32   RLLGILNDSSAAVLASIGHQTGLFDVMAGLPPASSEQIADAAGLNERYVREWLGGMVTAR  91

Query  74   IVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGVPYS  133
             VEY   + TY L    A  +    G DNLA   Q+++L+G V  K+   FR GGG+ Y 
Sbjct  92   FVEYRPAAGTYRLDPALAPSVC-GQGVDNLARTLQYITLMGGVADKIAHKFRTGGGLGYE  150

Query  134  EYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMAQAF  193
            +YP F  + A  S  V DA+L+  +LPL  G  D L++G DVAD GCG+G AV LMA AF
Sbjct  151  DYPDFVGIQAADSASVHDASLVSAILPLA-GCVDSLQAGIDVADIGCGAGHAVNLMAGAF  209

Query  194  GASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHDQAQ  253
             ASRFTG DF ++AV AG  EA RLGL N  FE  D A+LD V  +DVITVFDAIHDQA+
Sbjct  210  PASRFTGYDFFEDAVLAGRAEARRLGLGNVRFELLDAADLDIVEGFDVITVFDAIHDQAR  269

Query  254  PARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALDGAG  313
            PA+VLQNI+RALRP G  LMVDIKASS+L DNV +P  T+LY  S  HCM+VSLA  G G
Sbjct  270  PAKVLQNIHRALRPDGTFLMVDIKASSELIDNVELPWGTFLYAISTFHCMSVSLAQGGDG  329

Query  314  LGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            LGTVWG QLA SM+  AGF  V V E+E D  N Y++ARK
Sbjct  330  LGTVWGVQLAESMVRAAGFATVDVKELEEDPFNAYFVARK  369


>gi|161528965|ref|YP_001582791.1| methyltransferase type 11 [Nitrosopumilus maritimus SCM1]
 gi|160340266|gb|ABX13353.1| Methyltransferase type 11 [Nitrosopumilus maritimus SCM1]
Length=344

 Score =  368 bits (945),  Expect = 8e-100, Method: Compositional matrix adjust.
 Identities = 175/342 (52%), Positives = 232/342 (68%), Gaps = 2/342 (0%)

Query  11   FGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMT  70
            F +  +  ++ A +A+L+SVGH+T L D M+ L P+TS EIA AA L ERYVREWLGG+ 
Sbjct  4    FEDEMLDVMNKAAIALLLSVGHRTKLFDAMSKLEPSTSQEIATAANLNERYVREWLGGLV  63

Query  71   TGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGV  130
            T +I++YD  S  YSL   +A  LTR  G  N A   Q++  L  VE  ++ CF +GGGV
Sbjct  64   TSKIIDYDPESQKYSLSKEKAEFLTRD-GEYNFASSMQWIPALAYVEDHIVDCFEKGGGV  122

Query  131  PYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMA  190
             Y  + RFH +MAE S      AL+  +LPL+    ++L SG  V D GCGSGRA+ LMA
Sbjct  123  SYEMFNRFHTVMAEESQQTVLPALVKEILPLIPTY-EKLHSGLKVLDVGCGSGRAINLMA  181

Query  191  QAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHD  250
            ++F  S FTG DFS EA+     EA +LGL+N TFE+ D A  D   ++DVIT FDAIHD
Sbjct  182  KSFPNSHFTGYDFSSEAIQNAKNEAQKLGLSNVTFEKQDAANFDSENSFDVITAFDAIHD  241

Query  251  QAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALD  310
            QA P +VL+NI +AL+P G+ +M DI+ASS+LE+N+   L+ YLYT S +HCMTVSLAL+
Sbjct  242  QANPDKVLENIKKALKPDGIFMMQDIRASSKLENNMNHSLAPYLYTVSCLHCMTVSLALE  301

Query  311  GAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
            G GLG +WG++LAT ML +AGF+ V V E+  D +N YYIA+
Sbjct  302  GKGLGAMWGKELATQMLNEAGFSSVDVKELPHDPINYYYIAK  343


>gi|149174180|ref|ZP_01852808.1| hypothetical protein PM8797T_13363 [Planctomyces maris DSM 8797]
 gi|148847160|gb|EDL61495.1| hypothetical protein PM8797T_13363 [Planctomyces maris DSM 8797]
Length=361

 Score =  367 bits (943),  Expect = 1e-99, Method: Compositional matrix adjust.
 Identities = 175/348 (51%), Positives = 234/348 (68%), Gaps = 0/348 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            E T+EFG + +  ++ + L+ ++S+GH+  L D M+ +  ATS  IAE +GL ERYVREW
Sbjct  12   ERTDEFGQKLLQIVNHSALSFMLSIGHRARLFDIMSEMEHATSEAIAEQSGLNERYVREW  71

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LG M TG IVEYD    T  LPA  A +LTRAAG +N A   Q+ S+LG VE +++ CF 
Sbjct  72   LGAMVTGGIVEYDPVLKTCFLPAEHAALLTRAAGSNNFATTMQWFSVLGSVEDRIVDCFS  131

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
            EGGGVPYSE+ RFH++MAE S       L + +LPLV GL D+L++G +V D GCGSG A
Sbjct  132  EGGGVPYSEFARFHEVMAEESYNSVVCGLFEHILPLVPGLEDKLKAGIEVLDIGCGSGLA  191

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            +  MA AF  SRFTG D S+E++      A + G+ N TF+  D++E++   A+D+IT F
Sbjct  192  LIEMAAAFPQSRFTGFDISEESIGRAQASAVKRGVTNVTFQVQDVSEMNMTDAFDLITAF  251

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            D IHDQA+P +VL+ +  AL+PGG  LM DI ASS +E N+  PL    YT S MHCMTV
Sbjct  252  DVIHDQAKPDQVLREVNAALKPGGTFLMQDIAASSNVEQNITNPLGPMFYTISTMHCMTV  311

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            SLA  GAGLGT WG++LA SML +AGF ++ V E+  D++N +Y   K
Sbjct  312  SLAQGGAGLGTCWGKELACSMLEEAGFNNIDVQELPHDIMNYFYTMTK  359


>gi|239990341|ref|ZP_04711005.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
 gi|291447349|ref|ZP_06586739.1| methyltransferase type 11 [Streptomyces roseosporus NRRL 15998]
 gi|291350296|gb|EFE77200.1| methyltransferase type 11 [Streptomyces roseosporus NRRL 15998]
Length=361

 Score =  367 bits (941),  Expect = 2e-99, Method: Compositional matrix adjust.
 Identities = 202/361 (56%), Positives = 246/361 (69%), Gaps = 10/361 (2%)

Query  1    MSGALETT------EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEA  54
            MS  +E T      EEF  R +  ++ + L  L SVGH+T L D MA LPP+TS  IA A
Sbjct  1    MSHTIERTTDPVRQEEFAGRMLQVLNDSCLGYLCSVGHRTRLFDVMAQLPPSTSERIAGA  60

Query  55   AGLEERYVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLG  114
            AGL ERYVREWLGG+T G +VEYD    TY LP   A  L R AGPDNLA   Q ++L+G
Sbjct  61   AGLNERYVREWLGGVTVGGLVEYDPADGTYRLPPEHAASLCRDAGPDNLASFLQDLALIG  120

Query  115  EVEQKVIRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGA-  173
             VE +V+  FR+GGGVPYS YP+F +L AE +  V+DAAL+D ++PLV GLP+RL SG  
Sbjct  121  LVEDEVVTAFRDGGGVPYSSYPKFQELQAEETARVYDAALVDAIIPLVPGLPERLDSGPG  180

Query  174  -DVADFGCGSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAE  232
             DV D G G G AV L+A+AF ASRFTG+D S+  +AA  EEAA LGL NA FE  D A 
Sbjct  181  LDVLDVGTGQGHAVNLLARAFPASRFTGVDMSEGGIAAAREEAALLGLRNARFELTDAAA  240

Query  233  LDKVGAYDVITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLST  292
            +   G+YD+IT FD IHD A+PA  L  +  ALR  GV LM DI ASS+LE+N+ +PL  
Sbjct  241  V--TGSYDLITAFDVIHDLARPAETLAAVAGALRDDGVFLMGDIAASSRLEENLDLPLGP  298

Query  293  YLYTTSLMHCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
             LYT S+ +CMT SL+  GAGLGTVWGRQ A  ML +AGF DV V E+E D+LN YY+AR
Sbjct  299  ALYTFSVFYCMTTSLSEGGAGLGTVWGRQTALRMLEEAGFGDVEVREVEGDILNVYYVAR  358

Query  353  K  353
            K
Sbjct  359  K  359


>gi|182436334|ref|YP_001824053.1| putative methyltransferase [Streptomyces griseus subsp. griseus 
NBRC 13350]
 gi|178464850|dbj|BAG19370.1| putative methyltransferase [Streptomyces griseus subsp. griseus 
NBRC 13350]
Length=361

 Score =  366 bits (940),  Expect = 3e-99, Method: Compositional matrix adjust.
 Identities = 199/347 (58%), Positives = 240/347 (70%), Gaps = 4/347 (1%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            EEF  R V  ++ + L  L S+GH+T L D MA LPP+TS EIA AAGL ERYVREWLGG
Sbjct  15   EEFAGRMVRVLNDSCLGYLCSLGHRTRLFDVMARLPPSTSEEIAGAAGLHERYVREWLGG  74

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            +T G IV YD    TY LP   A  L R AGPDNLA   Q ++L+G VE +V+  FR+GG
Sbjct  75   VTVGGIVVYDPADRTYRLPPEHAASLCRDAGPDNLASFLQDLALIGLVEDEVVTAFRDGG  134

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRS--GADVADFGCGSGRAV  186
            GVPYS YPRF +L AE +  V+DAAL+D ++PLV GLP+RL S  G DV D G G G AV
Sbjct  135  GVPYSSYPRFQELQAEETARVYDAALVDAIIPLVPGLPERLASDAGLDVLDVGTGQGHAV  194

Query  187  KLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFD  246
             L+A+AF A RFTG+D S   +AA  +EA RLGL NA FE  D A +   G YD++T FD
Sbjct  195  NLLARAFPAGRFTGVDMSRSGIAAARDEAERLGLPNARFEVADAAGV--TGGYDLVTAFD  252

Query  247  AIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVS  306
             IHD A+PA  L  +  ALR  GV LM DI ASS+LE+N+G+PL   LYT S+ +CMTVS
Sbjct  253  VIHDLARPAETLAAVAGALRDDGVFLMGDIAASSRLEENLGLPLGPALYTFSVFYCMTVS  312

Query  307  LALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            L   GAGLGTVWGRQ A  MLA+AGF +V V E+E D+LN YY+ARK
Sbjct  313  LGEGGAGLGTVWGRQTALRMLAEAGFGEVAVREVEGDILNVYYVARK  359


>gi|326776958|ref|ZP_08236223.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
 gi|326657291|gb|EGE42137.1| Methyltransferase type 12 [Streptomyces griseus XylebKG-1]
Length=361

 Score =  365 bits (938),  Expect = 4e-99, Method: Compositional matrix adjust.
 Identities = 198/347 (58%), Positives = 240/347 (70%), Gaps = 4/347 (1%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            EEF  R V  ++ + L  L S+GH+T L D MA LPP+TS EIA AAGL ERYVREWLGG
Sbjct  15   EEFAGRMVRVLNDSCLGYLCSLGHRTRLFDVMARLPPSTSEEIAGAAGLHERYVREWLGG  74

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            +T G IV YD    TY LP   A  L R AGPDNLA   Q ++L+G VE +V+  FR+GG
Sbjct  75   VTVGGIVVYDPADRTYRLPPEHAASLCRDAGPDNLASFLQDLALIGLVEDEVVTAFRDGG  134

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRS--GADVADFGCGSGRAV  186
            GVPYS YPRF +L AE +  V+DAAL+D ++PLV GLP+RL S  G DV D G G G AV
Sbjct  135  GVPYSSYPRFQELQAEETARVYDAALVDAIIPLVPGLPERLASDAGLDVLDVGTGQGHAV  194

Query  187  KLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFD  246
             L+A+AF A RFTG+D S   +AA  +EA RLGL NA FE  D A +   G YD++T FD
Sbjct  195  NLLARAFPAGRFTGVDMSRSGIAAARDEAERLGLPNARFEVADAAGV--TGGYDLVTAFD  252

Query  247  AIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVS  306
             +HD A+PA  L  +  ALR  GV LM DI ASS+LE+N+G+PL   LYT S+ +CMTVS
Sbjct  253  VVHDLARPAETLAAVAGALRDDGVFLMGDIAASSRLEENLGLPLGPALYTFSVFYCMTVS  312

Query  307  LALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            L   GAGLGTVWGRQ A  MLA+AGF +V V E+E D+LN YY+ARK
Sbjct  313  LGEGGAGLGTVWGRQTALRMLAEAGFGEVAVREVEGDILNVYYVARK  359


>gi|148360151|ref|YP_001251358.1| transcriptional regulator [Legionella pneumophila str. Corby]
 gi|296108027|ref|YP_003619728.1| transcriptional regulator [Legionella pneumophila 2300/99 Alcoy]
 gi|148281924|gb|ABQ56012.1| transcriptional regulator [Legionella pneumophila str. Corby]
 gi|295649929|gb|ADG25776.1| transcriptional regulator [Legionella pneumophila 2300/99 Alcoy]
Length=356

 Score =  363 bits (932),  Expect = 2e-98, Method: Compositional matrix adjust.
 Identities = 170/345 (50%), Positives = 224/345 (65%), Gaps = 0/345 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E F  R ++ ++ A L +++S+GH+TGL D M  L  A+S  IAEAAG  ERYVREWL  
Sbjct  12   EAFAERLLSVLNDAALTLMISIGHRTGLFDVMDELDFASSEVIAEAAGCNERYVREWLNA  71

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            +  G IV YDA + TY LPA  A  LTR + P N+AVIAQF+ +L  VE  V+  F+ GG
Sbjct  72   LVVGGIVNYDAHAKTYQLPAEHASFLTRKSSPQNIAVIAQFIPVLAYVENGVVDAFKHGG  131

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            GVPY  Y RFH++MAE SG    ++L D + P+V GL D+L  G  V D GCG GRA+ L
Sbjct  132  GVPYEAYHRFHEVMAEESGQTILSSLADKIFPMVHGLVDKLNQGIHVLDIGCGYGRALIL  191

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            MA+ +  S+FTG D  DE +A     A    + N  FE+ DL+  D+   YD+IT FD I
Sbjct  192  MAKTYPQSQFTGYDLCDETIAHAVHAAKENKIQNIHFEKMDLSVWDEQEKYDLITSFDVI  251

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HDQA+PA+VL N+++AL+P G+ LM DIK SS +  NV  PL  ++YT S MHCMTVSL+
Sbjct  252  HDQAKPAQVLSNVFKALKPQGIFLMQDIKTSSDVAGNVHHPLGAFIYTISCMHCMTVSLS  311

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
             +G GLG  WG +LA  ML +AGF  +    +E D++N YY+ RK
Sbjct  312  QNGLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK  356


>gi|52842605|ref|YP_096404.1| transcriptional regulator [Legionella pneumophila subsp. pneumophila 
str. Philadelphia 1]
 gi|52629716|gb|AAU28457.1| transcriptional regulator [Legionella pneumophila subsp. pneumophila 
str. Philadelphia 1]
Length=356

 Score =  361 bits (927),  Expect = 8e-98, Method: Compositional matrix adjust.
 Identities = 167/343 (49%), Positives = 224/343 (66%), Gaps = 0/343 (0%)

Query  11   FGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMT  70
            F  R ++ ++ A L +++S+GH+TGL D M  L  A+S  IAEAAG  ERYVREWL  + 
Sbjct  14   FAERLLSVLNDAALTLMISIGHRTGLFDVMDKLDFASSEVIAEAAGCNERYVREWLNALV  73

Query  71   TGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGV  130
             G IV+YDA +  Y LPA  A  LTR + P N+AV+AQF+ +L  VE  ++  F+ GGGV
Sbjct  74   VGGIVDYDAHTKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGIVDAFKHGGGV  133

Query  131  PYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMA  190
            PY  Y RFH++MAE SG    ++L D +LP+V GL D+L  G  V D GCG GRA+ LMA
Sbjct  134  PYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQVLDIGCGYGRALILMA  193

Query  191  QAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHD  250
            + +  S+FTG D  DE +A     A +  + N  FE+ DL+  D+   YD+IT FD IHD
Sbjct  194  KTYPQSQFTGYDLCDETIAHAVHSAKKNKIQNIHFEKMDLSVWDEQEKYDLITSFDVIHD  253

Query  251  QAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALD  310
            QA+PA+VL N+++AL+P G+ LM DIK SS +  NV  PL   +YT S MHCMTVSL+ +
Sbjct  254  QAKPAQVLSNVFKALKPHGIFLMQDIKTSSDVAGNVHHPLGALIYTISCMHCMTVSLSQN  313

Query  311  GAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            G GLG  WG +LA  ML +AGF  +    +E D++N YY+ RK
Sbjct  314  GLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK  356


>gi|258652793|ref|YP_003201949.1| type 12 methyltransferase [Nakamurella multipartita DSM 44233]
 gi|258556018|gb|ACV78960.1| Methyltransferase type 12 [Nakamurella multipartita DSM 44233]
Length=380

 Score =  360 bits (924),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 187/344 (55%), Positives = 225/344 (66%), Gaps = 0/344 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E F  R +  I     A+ VS+GH+TGL DTM  LPP+TS EIA A GL+ERYVREWL  
Sbjct  36   EAFAGRVLDVISDGATALTVSIGHRTGLFDTMEELPPSTSAEIARAGGLQERYVREWLAA  95

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            M  G IV++D    T+ LPA  A +LTR AG DNLA +AQ + LL   E+ V  CFR+GG
Sbjct  96   MLVGGIVDHDPAEGTWHLPAEHAAVLTRRAGKDNLAKLAQLIGLLAGAERDVAACFRDGG  155

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            GVPYS Y  FH LMAE S  + +  LID VLPLVDGL +RL  G  VAD GCGSG  + +
Sbjct  156  GVPYSAYTEFHALMAEDSKDMAEGILIDEVLPLVDGLTERLERGISVADVGCGSGHHLTV  215

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            +A AF  SRF G DFS+EA+AA    A   GL N  FE  D+A+L   G +D +T FDAI
Sbjct  216  LAAAFPRSRFVGYDFSEEAIAAARAGATAKGLPNVRFELRDVADLTGTGPFDFVTAFDAI  275

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HDQA PA VL  + RAL P GV LMVD++ASS   +NVGVP + +LY  SL+HCMTVSLA
Sbjct  276  HDQAHPAAVLDGVARALAPDGVFLMVDLRASSNPHENVGVPAAAFLYGVSLLHCMTVSLA  335

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
              G GLG  WG Q A  ML  AGF  V V  ++ D +N+YY+ R
Sbjct  336  QGGTGLGAAWGEQTAIRMLHAAGFGSVDVRAVDGDFVNSYYLGR  379


>gi|54295236|ref|YP_127651.1| hypothetical protein lpl2319 [Legionella pneumophila str. Lens]
 gi|53755068|emb|CAH16559.1| hypothetical protein lpl2319 [Legionella pneumophila str. Lens]
Length=356

 Score =  360 bits (924),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 168/343 (49%), Positives = 223/343 (66%), Gaps = 0/343 (0%)

Query  11   FGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMT  70
            F  R ++ ++ A L +++S+GH+TGL D M  L  A+S  IAEAAG  ERYVREWL  + 
Sbjct  14   FAERLLSVLNDAALTLMISIGHRTGLFDVMDELDFASSEVIAEAAGCNERYVREWLNALV  73

Query  71   TGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGV  130
             G IV+YDA +  Y LPA  A  LTR + P N+AV+AQF+ +L  VE  V+  F+ GGGV
Sbjct  74   VGGIVDYDAHAKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGVVDAFKHGGGV  133

Query  131  PYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMA  190
            PY  Y RFH++MAE SG    ++L D +LP+V GL D+L  G  V D GCG GRA+ LMA
Sbjct  134  PYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQVLDIGCGYGRALILMA  193

Query  191  QAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHD  250
            + +  S+FTG D  DE +A     A    + N  FE+ DL+  D+   YD+IT FD IHD
Sbjct  194  KTYPQSQFTGYDLCDETIAHAVHSAKENKIQNIHFEKMDLSVWDEQEKYDLITSFDVIHD  253

Query  251  QAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALD  310
            QA+PA+VL N+++AL+P G+ LM DIK SS +  NV  PL   +YT S MHCMTVSL+ +
Sbjct  254  QAKPAQVLSNVFKALKPQGIFLMQDIKTSSDVARNVHHPLGALIYTISCMHCMTVSLSQN  313

Query  311  GAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            G GLG  WG +LA  ML +AGF  +    +E D++N YY+ RK
Sbjct  314  GLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK  356


>gi|54298398|ref|YP_124767.1| hypothetical protein lpp2462 [Legionella pneumophila str. Paris]
 gi|53752183|emb|CAH13615.1| hypothetical protein lpp2462 [Legionella pneumophila str. Paris]
Length=356

 Score =  360 bits (924),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 168/343 (49%), Positives = 224/343 (66%), Gaps = 0/343 (0%)

Query  11   FGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMT  70
            F  R ++ ++ A L +++S+GH+TGL D M  L  A+S  IAEAAG  ERYVREWL  + 
Sbjct  14   FAERLLSVLNDAALTLMISIGHRTGLFDVMDELDFASSEVIAEAAGCNERYVREWLNALV  73

Query  71   TGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGV  130
             G IV+YDA +  Y LPA  A  LTR + P N+AV+AQF+ +L  VE  V+  F+ GGGV
Sbjct  74   VGGIVDYDAHAKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGVVDAFKHGGGV  133

Query  131  PYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMA  190
            PY  Y RFH++MAE SG    ++L D +LP+V GL D+L  G  + D GCG GRA+ LMA
Sbjct  134  PYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQILDIGCGYGRALILMA  193

Query  191  QAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHD  250
            + +  S+FTG D  DE +A     A    + N  FE+ DL+  D+   YD+IT FD IHD
Sbjct  194  KTYPQSQFTGYDLCDETIAHAVHSAKENKIQNIHFEKMDLSVWDEQEKYDLITSFDVIHD  253

Query  251  QAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALD  310
            QA+PA+VL N+++AL+P G+ LM DIKASS +  NV  PL   +YT S MHCMTVSL+ +
Sbjct  254  QAKPAQVLSNVFKALKPRGIFLMQDIKASSDVAGNVHHPLGALIYTISCMHCMTVSLSQN  313

Query  311  GAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            G GLG  WG +LA  ML +AGF  +    +E D++N YY+ RK
Sbjct  314  GLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK  356


>gi|172035610|ref|YP_001802111.1| hypothetical protein cce_0694 [Cyanothece sp. ATCC 51142]
 gi|171697064|gb|ACB50045.1| unknown [Cyanothece sp. ATCC 51142]
Length=359

 Score =  360 bits (923),  Expect = 2e-97, Method: Compositional matrix adjust.
 Identities = 171/335 (52%), Positives = 226/335 (68%), Gaps = 0/335 (0%)

Query  19   IDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMTTGQIVEYD  78
            ++   L++++S+GH+T L D MA LPPATS  IAEAAGL ERYVREWLG M  G IV Y 
Sbjct  22   LNHGALSLMISIGHRTQLFDVMANLPPATSDTIAEAAGLNERYVREWLGAMVVGGIVTYH  81

Query  79   AGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGVPYSEYPRF  138
                TY LP+  A  LTR A P+N+AV  QF+ +L +VE ++IRCF++GGG+PY+ YPRF
Sbjct  82   PDDRTYQLPSEYAAFLTRQATPNNMAVTMQFIPVLAQVEDEIIRCFQQGGGLPYTAYPRF  141

Query  139  HKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMAQAFGASRF  198
            H++MAE SG    A L + +LPLV GL  +L  G  V D GCGSGRA+  +AQ +  S+F
Sbjct  142  HEVMAEDSGQGVVAVLDEAILPLVPGLTAKLSDGIKVLDVGCGSGRAISKLAQLYPRSQF  201

Query  199  TGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHDQAQPARVL  258
             G+DFS+ A+A    +A  LGL N  FE  D A L+    +D+IT FDAIHDQA P  VL
Sbjct  202  IGVDFSETAIALARSQAQGLGLNNLKFEVQDAANLNFEQPFDLITAFDAIHDQAYPDLVL  261

Query  259  QNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALDGAGLGTVW  318
            ++IY  L   G+ LM DI+AS  + +N+  P  T+LYT S +HCM+VSLA +GAGLGTVW
Sbjct  262  KSIYENLEDQGIFLMQDIRASRDVHENLDHPARTFLYTISCLHCMSVSLANNGAGLGTVW  321

Query  319  GRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            G + A  ML + GF  + V ++  D +NN+YI +K
Sbjct  322  GEETALEMLKETGFEQIAVKQLPHDPMNNFYIVQK  356


>gi|307611249|emb|CBX00904.1| hypothetical protein LPW_26071 [Legionella pneumophila 130b]
Length=356

 Score =  359 bits (922),  Expect = 3e-97, Method: Compositional matrix adjust.
 Identities = 168/343 (49%), Positives = 223/343 (66%), Gaps = 0/343 (0%)

Query  11   FGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMT  70
            F  R ++ ++ A L +++S+GH+TGL D M  L  A+S  IAEAAG  ERYVREWL  + 
Sbjct  14   FAERLLSVLNDAALTLMISIGHRTGLFDVMDELDFASSEVIAEAAGCNERYVREWLNALV  73

Query  71   TGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGV  130
             G IV+YDA +  Y LPA  A  LTR + P N+AV+AQF+ +L  VE  V+  F+ GGGV
Sbjct  74   VGGIVDYDAHAKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGVVDAFKHGGGV  133

Query  131  PYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMA  190
            PY  Y RFH++MAE SG    ++L D +LP+V GL D+L  G  V D GCG GRA+ LMA
Sbjct  134  PYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQVLDIGCGYGRALILMA  193

Query  191  QAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHD  250
            + +  S+FTG D  DE +A     A    + N  FE+ DL+  D+   YD+IT FD IHD
Sbjct  194  KTYPQSQFTGYDLCDETIAHAVHSAKENKIQNIHFEKMDLSVWDEREKYDLITSFDVIHD  253

Query  251  QAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALD  310
            QA+PA+VL N+++AL+P G+ LM DIK SS +  NV  PL   +YT S MHCMTVSL+ +
Sbjct  254  QAKPAQVLSNVFKALKPQGIFLMQDIKTSSDVARNVHHPLGALIYTISCMHCMTVSLSQN  313

Query  311  GAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            G GLG  WG +LA  ML +AGF  +    +E D++N YY+ RK
Sbjct  314  GLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK  356


>gi|15827949|ref|NP_302212.1| transcriptional regulator [Mycobacterium leprae TN]
 gi|221230426|ref|YP_002503842.1| putative transcriptional regulator [Mycobacterium leprae Br4923]
 gi|13093502|emb|CAC30736.1| putative transcriptional regulator [Mycobacterium leprae]
 gi|219933533|emb|CAR71878.1| putative transcriptional regulator [Mycobacterium leprae Br4923]
Length=322

 Score =  355 bits (910),  Expect = 9e-96, Method: Compositional matrix adjust.
 Identities = 178/273 (66%), Positives = 202/273 (74%), Gaps = 0/273 (0%)

Query  40   MAGLPPATSMEIAEAAGLEERYVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAG  99
            M GL   TS +IA  AGL ERYVREWLG MTTG +V+Y A + TYSL  HR  +L  A G
Sbjct  1    MVGLSLVTSTQIAYVAGLNERYVREWLGDMTTGHVVDYYAETGTYSLSVHRVAVLVWATG  60

Query  100  PDNLAVIAQFVSLLGEVEQKVIRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVL  159
             +NLA +AQF+ L    EQ+ I  F +  G PYSE+PRF+ LMAEMSG +FDAA +DVVL
Sbjct  61   TNNLASVAQFIPLFSGFEQQFIGGFCDDVGGPYSEFPRFYSLMAEMSGAMFDAAFVDVVL  120

Query  160  PLVDGLPDRLRSGADVADFGCGSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLG  219
            PL +GLP+RLRSGA VADF CGSG  V ++ +AF AS F GIDFS+EAVA  T E  RLG
Sbjct  121  PLANGLPERLRSGAGVADFDCGSGHVVNVLVRAFPASWFIGIDFSNEAVAIHTAEEDRLG  180

Query  220  LANATFERHDLAELDKVGAYDVITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKAS  279
            L   TFE H+LA LDK  AYDVITVFDA HD AQP RVL+NIY+ALRPG VLLM  IK S
Sbjct  181  LGTVTFESHNLARLDKAAAYDVITVFDASHDHAQPVRVLENIYQALRPGDVLLMASIKVS  240

Query  280  SQLEDNVGVPLSTYLYTTSLMHCMTVSLALDGA  312
            SQLEDNV V +S YLYT SLMHCMTVSLAL GA
Sbjct  241  SQLEDNVDVLMSIYLYTASLMHCMTVSLALQGA  273


>gi|220912550|ref|YP_002487859.1| type 11 methyltransferase [Arthrobacter chlorophenolicus A6]
 gi|219859428|gb|ACL39770.1| Methyltransferase type 11 [Arthrobacter chlorophenolicus A6]
Length=360

 Score =  352 bits (904),  Expect = 4e-95, Method: Compositional matrix adjust.
 Identities = 186/339 (55%), Positives = 231/339 (69%), Gaps = 4/339 (1%)

Query  14   RFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGGMTTGQ  73
            R +  ++    A+L+S+GHQTGL D +A LPPATS +IA+A+GL ERYVREWLGGM T  
Sbjct  23   RLMGILNDGSAAVLISIGHQTGLFDVLAALPPATSTQIADASGLNERYVREWLGGMVTTG  82

Query  74   IVEYDAGSSTYSL-PAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGGGVPY  132
            IV Y   + TY+L PA+   M     G DNLA    FV+L+GEV  KV   FR GGG+ Y
Sbjct  83   IVHYGPATKTYALDPAYVPSM--TGTGVDNLARTLTFVTLMGEVAGKVAGKFRTGGGLHY  140

Query  133  SEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKLMAQA  192
            +EYP F  + A  S  V D +L+DV+LPL   + D L++G  VAD GCG+G A+ LMAQA
Sbjct  141  AEYPGFVAIQAADSASVHDFSLVDVILPLSGRVSD-LQAGITVADIGCGAGHAINLMAQA  199

Query  193  FGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAIHDQA  252
            F AS FTG DF +EA+ AG  EA +LGLAN  FE  D A L+     D+ITVFDA+HDQA
Sbjct  200  FPASSFTGYDFFEEAIDAGRTEAQQLGLANVRFELADAAALELREELDLITVFDAVHDQA  259

Query  253  QPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLALDGA  312
             PA VL+NI RAL+PGG  LMVDIKASS LE+NV +P + +LY  S  HCM+VSLA DG 
Sbjct  260  HPAAVLRNIRRALKPGGTFLMVDIKASSNLEENVDLPWAAFLYAISTTHCMSVSLAQDGD  319

Query  313  GLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIA  351
            GLGTVWG Q A +ML  AGF +V V ++  D  N Y++A
Sbjct  320  GLGTVWGVQQAEAMLRGAGFNEVRVLDLAEDPFNAYFVA  358


>gi|256394886|ref|YP_003116450.1| methyltransferase type 11 [Catenulispora acidiphila DSM 44928]
 gi|256361112|gb|ACU74609.1| Methyltransferase type 11 [Catenulispora acidiphila DSM 44928]
Length=356

 Score =  352 bits (902),  Expect = 6e-95, Method: Compositional matrix adjust.
 Identities = 188/345 (55%), Positives = 233/345 (68%), Gaps = 1/345 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E F  R V  ++ A L ++  +GH T L DTMAG+  ATS EIA AAGL+ERYVREWLG 
Sbjct  13   EAFAGRMVQIVNDACLGLMTGLGHDTHLFDTMAGMAAATSEEIARAAGLKERYVREWLGA  72

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            M  G IV+YDA  +TY LP   A  LTRAAGP NLA IAQ +S++GEVEQ+V   F  G 
Sbjct  73   MVAGGIVDYDAAHATYVLPPEHAASLTRAAGPGNLARIAQDLSMMGEVEQQVAEAFSTGA  132

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            GVPYS YPRF  + AE SG VFD AL+D ++PL  G+ +RLR G DV D G G G AV +
Sbjct  133  GVPYSAYPRFQAVQAEESGEVFDLALVDAIIPLAPGMTERLREGIDVLDIGTGQGHAVNV  192

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            +A+AF ASR  G+D S+E +AA   EAA  GL N  F+  D  +L    +YD+IT FD I
Sbjct  193  LAKAFPASRVHGVDRSEEGIAAARAEAAEWGLTNTDFQVGDSTDL-PTDSYDLITAFDVI  251

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HD AQP R L +I  ALR GGV LM DI ASS++EDN+  PL   LYT S+ +CM+VSL+
Sbjct  252  HDLAQPTRTLASIAGALREGGVFLMGDIAASSRVEDNIDHPLGPGLYTFSVFYCMSVSLS  311

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
              G  LGTVWG Q A  MLA+AGF++V    +E D+LN YY+A++
Sbjct  312  EHGEALGTVWGYQTALQMLAEAGFSNVETQRVEGDILNVYYVAQR  356


>gi|153006766|ref|YP_001381091.1| type 11 methyltransferase [Anaeromyxobacter sp. Fw109-5]
 gi|152030339|gb|ABS28107.1| Methyltransferase type 11 [Anaeromyxobacter sp. Fw109-5]
Length=363

 Score =  346 bits (887),  Expect = 4e-93, Method: Compositional matrix adjust.
 Identities = 178/350 (51%), Positives = 225/350 (65%), Gaps = 3/350 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            +  E F     A ++S  LA+++SVGH+TGL DT+A  P + S  +A AAGLEERYVREW
Sbjct  13   KRAERFAEGMAATLNSGALAVMISVGHRTGLFDTLAEHPGSPSAALARAAGLEERYVREW  72

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LG M  G+IVE+DA   TY+LPA  A  LTRAA P+NLAV AQ++ ++  VE  V+ CFR
Sbjct  73   LGAMVAGRIVEFDAERRTYTLPAEHAAFLTRAAAPNNLAVYAQYIPVVASVEDDVLACFR  132

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             GGGVPY  Y RFH++M+E S       L   VLPL +GL  RL +GA +AD GCG GRA
Sbjct  133  AGGGVPYERYARFHEVMSEDSEQTILTVLFSDVLPLAEGLAARLEAGAALADLGCGRGRA  192

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKV---GAYDVI  242
            +  MA+ F  SRF G D S  AVA    +A RLGL NA F + DL + D+    GA+D +
Sbjct  193  LLRMAERFPRSRFVGYDLSSAAVAWARGQAERLGLGNARFLQRDLRDFDRSAEPGAFDAV  252

Query  243  TVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHC  302
            T FDA+HDQ  P  +L  I R LR  GV LM DI+ASS + +N   P   +LYT S MHC
Sbjct  253  TTFDAVHDQPAPLALLCGIRRTLRDDGVYLMQDIQASSDVAENRDHPFGPFLYTVSTMHC  312

Query  303  MTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
            + VSLA  G GLGT+WG   A +MLA+AGF  V V ++  D +N Y +AR
Sbjct  313  LAVSLAQGGDGLGTMWGTDTARAMLAEAGFGSVEVHQLPHDPMNAYLVAR  362


>gi|119963127|ref|YP_947427.1| hypothetical protein AAur_1664 [Arthrobacter aurescens TC1]
 gi|119949986|gb|ABM08897.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
Length=362

 Score =  344 bits (883),  Expect = 1e-92, Method: Compositional matrix adjust.
 Identities = 183/347 (53%), Positives = 233/347 (68%), Gaps = 2/347 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            ++ E+   R +  ++ + +A+L+ VGHQTGL +T+A LP A S  IA+AAGL ERYVREW
Sbjct  17   DSVEQAAGRMIGILNDSSIALLIGVGHQTGLFETLAALPAAGSDLIADAAGLNERYVREW  76

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LGGMT+   V+Y     TYSL      ++T   G +NLA   Q+V L+GEV  KV + FR
Sbjct  77   LGGMTSAGFVDYQPDRGTYSLRPEFVPVVT-GPGTENLARTLQYVPLMGEVAPKVAQAFR  135

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             GGG  Y +YPRFH +MA  S  V DA+L++ +LPL  G  D LR G  VAD GCG G A
Sbjct  136  TGGGTSYDDYPRFHHIMASESAAVNDASLVETILPLT-GCVDALRRGISVADIGCGEGHA  194

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            + L+A  F AS FTG DFS EA+AA ++EA+  GL+N  FE  D++ L+    +D++T F
Sbjct  195  MNLLAATFPASTFTGYDFSGEALAAASDEASAAGLSNVRFELQDVSRLETEEPFDLVTAF  254

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            DAIHDQA+PA VL+NI  AL+P G  LMVDI ASS+LEDNV +P + +LYT S  HCM V
Sbjct  255  DAIHDQARPAEVLKNIRAALKPEGTFLMVDINASSRLEDNVELPWAAFLYTISTFHCMAV  314

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
            SL   G GLGTVWG+Q AT ML DAGF  V V E+E D  N YY+AR
Sbjct  315  SLGQGGDGLGTVWGKQRATDMLLDAGFRAVEVKELEEDPFNAYYVAR  361


>gi|307545541|ref|YP_003898020.1| transcriptional regulator [Halomonas elongata DSM 2581]
 gi|307217565|emb|CBV42835.1| possible transcriptional regulatory protein [Halomonas elongata 
DSM 2581]
Length=359

 Score =  342 bits (877),  Expect = 5e-92, Method: Compositional matrix adjust.
 Identities = 179/349 (52%), Positives = 233/349 (67%), Gaps = 4/349 (1%)

Query  7    TTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWL  66
            TT++F  R V A++  GL +L S+G++TGLL+ MAG PP TS  +AE  GL+ERYVREWL
Sbjct  11   TTDDFEARLVQALNHGGLLLLTSLGYRTGLLEAMAGQPPITSQALAERTGLQERYVREWL  70

Query  67   GGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFRE  126
            GGM   ++VE D+ +++Y LP  RA +LT   G  NLAV AQF+ LLG VE  V+RCFRE
Sbjct  71   GGMVAAEVVETDSATASYWLPDERAALLT-DRGEANLAVYAQFMPLLGSVEDDVLRCFRE  129

Query  127  GGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAV  186
            GGGVPYS YPRF ++MA  SG     AL D +LPL  GL +RL SG  V D  CG GRA+
Sbjct  130  GGGVPYSRYPRFQEVMASDSGQTVLPALFDGILPLAPGLIERLESGIRVLDCACGRGRAL  189

Query  187  KLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKV---GAYDVIT  243
              MA+ F ASRFTG D S+EA+     +A R GL N  FE  DL++ D     GA++++T
Sbjct  190  LAMAERFPASRFTGYDLSEEAIGWARAQAERAGLTNLNFEVRDLSDFDTTATPGAFELVT  249

Query  244  VFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCM  303
             FD IHDQ QP R+L+ I+R+L   G+ L+ DI ASS    +   PL   LY  S+ HCM
Sbjct  250  TFDGIHDQGQPRRLLKGIHRSLTSDGIYLVQDIHASSHHHLDREHPLGAMLYAVSISHCM  309

Query  304  TVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
            TVSLA  G GLGT+WGR+ A + L +AGF D+ V ++E D+ N+Y++ R
Sbjct  310  TVSLAQGGEGLGTMWGRERALAYLEEAGFRDIQVHQLEHDIQNDYFVCR  358


>gi|88813318|ref|ZP_01128557.1| hypothetical protein NB231_07462 [Nitrococcus mobilis Nb-231]
 gi|88789490|gb|EAR20618.1| hypothetical protein NB231_07462 [Nitrococcus mobilis Nb-231]
Length=404

 Score =  340 bits (871),  Expect = 3e-91, Method: Compositional matrix adjust.
 Identities = 174/351 (50%), Positives = 222/351 (64%), Gaps = 3/351 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            +  + F    +  ++   L ++VS+GH+TGL D M   PP +S E+A  AGL ERYVREW
Sbjct  54   QQADAFAGNLLETLNRGALCLMVSIGHRTGLFDAMRDQPPLSSSELAVRAGLNERYVREW  113

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            LG M T  +VE       + LPA  A  LTRAA  DN+AV AQ+++LLG VE  ++ CFR
Sbjct  114  LGAMVTAGVVECSGSPPQFHLPAEHAAFLTRAAAADNVAVFAQYIALLGSVEDDIVECFR  173

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             GGGVPY+ +PRFH++MAE SG    ++L   +LPL+ GL DRL SG    D GCG GR 
Sbjct  174  NGGGVPYARFPRFHEVMAEDSGQSVLSSLESHILPLIPGLIDRLNSGIKALDVGCGRGRI  233

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLA---ELDKVGAYDVI  242
               +A+ F  S F G D S++A+AA  +EA    L N  F+  DL+   E  + GAYD I
Sbjct  234  GLRLAELFPNSHFVGFDLSEDAIAAARQEATDRALTNIIFQAADLSDFHECAETGAYDWI  293

Query  243  TVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHC  302
            T FDAIHDQAQP  VL+ I+RAL   GV LM DIK SSQ++ N+G P+ T+LYT S MHC
Sbjct  294  TTFDAIHDQAQPLNVLKGIHRALHGNGVYLMQDIKGSSQVQGNIGHPIGTFLYTVSCMHC  353

Query  303  MTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            MTVSLA DG GLG +WG +     L  AGF  V   E+E D  NN+Y+ RK
Sbjct  354  MTVSLAQDGEGLGAMWGEEKTRECLLHAGFRSVEKHELEHDFQNNWYVIRK  404


>gi|87308780|ref|ZP_01090919.1| hypothetical protein DSM3645_11092 [Blastopirellula marina DSM 
3645]
 gi|87288491|gb|EAQ80386.1| hypothetical protein DSM3645_11092 [Blastopirellula marina DSM 
3645]
Length=358

 Score =  332 bits (851),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 177/356 (50%), Positives = 237/356 (67%), Gaps = 4/356 (1%)

Query  1    MSGALE----TTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAG  56
            MS A+E      E FG RF+ A++ A + ++ S+GH+TGL DTMA LP ATS E+A A+G
Sbjct  1    MSTAMELDPAKMEAFGARFLEAMNGAAMMLMSSIGHRTGLFDTMADLPAATSAEVAAASG  60

Query  57   LEERYVREWLGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEV  116
            L ERYVREWL  + + Q+V++D    +Y LPA  A +LTRAA P NLA +AQ++++LG V
Sbjct  61   LNERYVREWLNALVSAQVVDFDPTEQSYRLPAEHAALLTRAATPSNLASVAQWIAVLGYV  120

Query  117  EQKVIRCFREGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVA  176
            E +++  F  GGGV Y E+ RFH +MA+ S     +A+I+ +LPLVDGL ++L  G DV 
Sbjct  121  ETQIVDKFSHGGGVCYHEFHRFHDVMADESSQTTVSAMIEHILPLVDGLLEKLERGIDVL  180

Query  177  DFGCGSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKV  236
            D GCGS +A+ L+A+ F  SRF G D   +A+ AG   A    L N T +  D+AEL   
Sbjct  181  DIGCGSAKALILLAERFPQSRFCGYDLCADAIVAGQRLAEEKDLPNLTLKVRDVAELIDC  240

Query  237  GAYDVITVFDAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYT  296
              +D+IT FDAIHDQA P +VL NI RALR  G+ LM DI+ASS +E N+  PL  ++YT
Sbjct  241  DRFDLITAFDAIHDQAYPDQVLSNISRALRRDGIFLMQDIRASSYVEKNIDQPLGAFIYT  300

Query  297  TSLMHCMTVSLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
             S MHCM+VSLA  G GLG  WG ++A  ML  AGF+ V +  +  D+LNNYY+AR
Sbjct  301  ISCMHCMSVSLAQGGLGLGAAWGEEMAQEMLIAAGFSQVDIHRLNHDILNNYYLAR  356


>gi|89056202|ref|YP_511653.1| type 12 methyltransferase [Jannaschia sp. CCS1]
 gi|88865751|gb|ABD56628.1| Methyltransferase type 12 [Jannaschia sp. CCS1]
Length=360

 Score =  330 bits (846),  Expect = 2e-88, Method: Compositional matrix adjust.
 Identities = 163/344 (48%), Positives = 215/344 (63%), Gaps = 0/344 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E F  RFV  ++   LA++ S+GH++GL D MA  P  TS  +A+  G+ ERY+REWLG 
Sbjct  16   EAFAQRFVGTLNEGALAVMTSLGHRSGLFDGMAANPDVTSQALADKIGVNERYLREWLGV  75

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            M T  +V YD  +++Y+LPA  A  LTRA+ PDN+AV  QF+ L   VE K++  FR G 
Sbjct  76   MVTSGVVAYDPVATSYTLPAEHAAFLTRASSPDNMAVTTQFIGLAASVEDKLLERFRTGQ  135

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            G+ Y ++ RFH++MAE S  +  A L   +LP+VDGL +RL  G DVADFGCG GRA+  
Sbjct  136  GLCYHDFDRFHEVMAEDSAQLTVANLTKAILPVVDGLVERLEHGIDVADFGCGGGRAMMT  195

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            +A+AF  SRF G D  ++A A    EA   GL+N ++E  DL+    VG +D++T FDA+
Sbjct  196  LAKAFPNSRFHGFDLCEDAFADTVAEAQFEGLSNLSYEARDLSSAHSVGTFDLVTAFDAV  255

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HDQ  P   L+ I R+LRP GV LM DI  S  LE N+G P    LYT S MHCM VSL 
Sbjct  256  HDQGDPKGFLRLIRRSLRPDGVFLMQDIGGSRDLEKNIGNPFGPLLYTISSMHCMPVSLG  315

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
              G GLG +WG + A   LA+ GF  V    +  D +N Y+IAR
Sbjct  316  QGGPGLGAMWGVETAEEYLAETGFASVETHRLPHDPMNAYFIAR  359


>gi|256823407|ref|YP_003147370.1| type 11 methyltransferase [Kangiella koreensis DSM 16069]
 gi|256796946|gb|ACV27602.1| Methyltransferase type 11 [Kangiella koreensis DSM 16069]
Length=354

 Score =  307 bits (786),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 151/347 (44%), Positives = 207/347 (60%), Gaps = 0/347 (0%)

Query  7    TTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWL  66
            T E F    V  ++ A   +++++GH+ GL D++  L   +S E+AE +G +ERY+REWL
Sbjct  8    TPEMFAEHLVLMLNHASTTVMIALGHKLGLFDSLEELESVSSRELAEHSGCDERYIREWL  67

Query  67   GGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFRE  126
              M T +I+ Y+    TY LP + A  L R   PDN+AV +QF+ L+G++  ++ + FR 
Sbjct  68   SVMVTAKIISYEPMHKTYILPKNYAMFLCRKYSPDNIAVTSQFIPLMGQMLPQLEKSFRS  127

Query  127  GGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAV  186
            G G+ YS+YP FH +MAE S      AL D +LPL+D + +RL+ G  V D GCG G A+
Sbjct  128  GNGLQYSDYPCFHSVMAEDSYQTVVCALFDHILPLMDDMTERLQWGIRVLDAGCGKGLAL  187

Query  187  KLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFD  246
              +AQ F  S F G D  ++A A   E A  L L N  F+  DL +  +  ++D I  FD
Sbjct  188  LKLAQEFPNSHFVGYDLCEDAFAETLEHAKALRLTNIEFQARDLRDFHEPESFDFIASFD  247

Query  247  AIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVS  306
            A+HDQA P  +L  IYRALRP G  LM DI  SS LE+N+  PL   LY+ S  HC  VS
Sbjct  248  AVHDQADPQALLDGIYRALRPRGTYLMQDIAGSSYLENNLDHPLGPLLYSISCAHCTPVS  307

Query  307  LALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            L   G GLGT+WG +LAT ML  AGF  +   ++E D  N Y+I RK
Sbjct  308  LGQGGPGLGTMWGEELATGMLQAAGFNKIQKHKLEHDPFNVYFINRK  354


>gi|220935738|ref|YP_002514637.1| type 11 methyltransferase [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|219997048|gb|ACL73650.1| Methyltransferase type 11 [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length=363

 Score =  306 bits (783),  Expect = 4e-81, Method: Compositional matrix adjust.
 Identities = 152/348 (44%), Positives = 212/348 (61%), Gaps = 0/348 (0%)

Query  6    ETTEEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREW  65
            E  + F +R    I+   +A+++S+GH+ GL + +A LPP+ S  IA  AGL ERYVREW
Sbjct  15   ERAQAFADRIAQLINDGAVAVMISLGHRAGLFEALASLPPSDSHTIARRAGLAERYVREW  74

Query  66   LGGMTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFR  125
            L  + TG IV+YD  +  Y+LP      LTR A   NLAV AQ V+L+G+V+  ++  FR
Sbjct  75   LAALVTGGIVDYDPATRRYALPGEHGACLTRDAPLGNLAVYAQHVALMGQVQDHILERFR  134

Query  126  EGGGVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRA  185
             G G  Y +YP FH +MAE SG    A L + +LPLV GL +RL  G  V D GCG G A
Sbjct  135  SGDGTRYEDYPCFHHMMAEDSGQTVVAQLFEQILPLVPGLRERLERGIAVLDAGCGRGEA  194

Query  186  VKLMAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVF  245
            +  +A+ F  SRFTG D   +A+      A   GL N +F   DL + D+   YD++T F
Sbjct  195  LIALARHFPESRFTGYDLCSDAIEDAARAARDAGLDNLSFGVRDLTDFDEQARYDLVTSF  254

Query  246  DAIHDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTV  305
            DA+HDQ  PA +++ ++R+LR  G  LM DI  S+QLE+N+  P++ +LY  S +HC  V
Sbjct  255  DAVHDQKAPADLIRRLHRSLRSQGTYLMQDIGGSAQLENNLDFPMAAFLYAISCVHCTPV  314

Query  306  SLALDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIARK  353
            SL   G GLGT+WG + A +ML DAGF  VT   +  D +N ++++ K
Sbjct  315  SLGQGGEGLGTMWGWETAEAMLMDAGFDRVTRHVLPHDPMNVWFVSHK  362


>gi|110633855|ref|YP_674063.1| methyltransferase type 11 [Mesorhizobium sp. BNC1]
 gi|110284839|gb|ABG62898.1| Methyltransferase type 11 [Chelativorans sp. BNC1]
Length=360

 Score =  296 bits (759),  Expect = 3e-78, Method: Compositional matrix adjust.
 Identities = 155/344 (46%), Positives = 213/344 (62%), Gaps = 0/344 (0%)

Query  9    EEFGNRFVAAIDSAGLAILVSVGHQTGLLDTMAGLPPATSMEIAEAAGLEERYVREWLGG  68
            E F  +    +DS  +A+++S+GH+ GL D +AGLP +TS  IA  A L ERYVREWL  
Sbjct  16   EAFSGKIAGMLDSGAVAVMISIGHRLGLFDVLAGLPASTSEAIAARAELSERYVREWLAV  75

Query  69   MTTGQIVEYDAGSSTYSLPAHRAGMLTRAAGPDNLAVIAQFVSLLGEVEQKVIRCFREGG  128
            M TG IV YD    +Y LPA  A  LTR A   N AV AQ ++LLG+++ +++ CF  G 
Sbjct  76   MVTGGIVTYDPSKKSYRLPAEHAASLTRGAELGNFAVYAQHIALLGQMQDRLLSCFETGE  135

Query  129  GVPYSEYPRFHKLMAEMSGMVFDAALIDVVLPLVDGLPDRLRSGADVADFGCGSGRAVKL  188
            G+ Y +YP FH++MAE S     A L + +LPLVDGL  +L +G +V D GCG G A+  
Sbjct  136  GLTYGDYPCFHQVMAEDSEQTVVAQLFETILPLVDGLKQQLAAGIEVLDAGCGRGLALME  195

Query  189  MAQAFGASRFTGIDFSDEAVAAGTEEAARLGLANATFERHDLAELDKVGAYDVITVFDAI  248
            MA+ F  SRFTG D  ++A+   T+ A + GL N  FE  DL   D+   +D+IT FDAI
Sbjct  196  MARYFPQSRFTGYDLGEDAIEFATDAARKAGLTNVKFEARDLTGYDEKARFDLITSFDAI  255

Query  249  HDQAQPARVLQNIYRALRPGGVLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLA  308
            HDQ  P  +++++  AL+PGGV L+ DI  S++LE+N+  P +  LY  S  HC  VSL 
Sbjct  256  HDQKDPQALIRSMKGALKPGGVYLVQDIGGSAKLENNLDFPFAPLLYAISCAHCTPVSLG  315

Query  309  LDGAGLGTVWGRQLATSMLADAGFTDVTVAEIESDVLNNYYIAR  352
              G GLGT+WG + A +ML  AGF  V    +  D +N +++AR
Sbjct  316  QGGLGLGTMWGWETAQAMLEAAGFHYVERTVLPHDPMNVWFVAR  359



Lambda     K      H
   0.319    0.135    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 657685396884


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40